RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 FREM3P0C091 2139 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 CCL14Q16627 93 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 UNQ6494/PRO21346Q6UXR6 183 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 LINC00305Q7Z4B0 112 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 MBD6Q96DN6 1003 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 C15orf65H3BRN8 121 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 PRSS12P56730 875 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 BLCAPP62952 87 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 TRAV26-2A0A0B4J265 109 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 GFI1Q99684 422 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 DLL3Q9NYJ7 618 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 XGP55808 180 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 IGHV1OR21-1A0A087WYE8 117 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 AGPAT4-IT1Q9H0P7 198 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 RALGAPA1Q6GYQ0 2036 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 MCM3APO60318 1980 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 RFPL3SP0C7P2 107 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF114Q8NC26 417 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 NBASA2RRP1 2371 aa3.4□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF32P17041 273 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 LDLRAD1Q5T700 205 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 ZCCHC24Q8N2G6 241 aaKnown RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 PHLDA1Q8WV24 401 aaPredicted RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 MIA3Q5JRA6 1907 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 SPINK4O60575 86 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 CRLF1O75462 422 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 SSC4DQ8WTU2 575 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 C11orf1Q9H5F2 150 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF407Q9C0G0 2248 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 K7EN84 100 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 COX7A2LO14548 114 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 CD70P32970 193 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 CMC4P56277 68 aaPredicted RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 BEAN1Q3B7T3 259 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 A0A1W2PP55 124 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 PCNX2A6NKB5 2137 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 TEX22C9J3V5 150 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 LST1O00453 97 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 SAP30O75446 220 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 Q9H3A6 140 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 A0A1W2PQU0 124 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 SHISA5Q8N114 240 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 JPT2Q9H910 190 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 ORMDL1Q9P0S3 153 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 SPRY4Q9C004 299 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 MYO7BQ6PIF6 2116 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 RNASE7Q9H1E1 156 aaKnown RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 SS18L1O75177 396 aaPredicted RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF80P51504 273 aaPredicted RBP3.39□□□□□ -1.87
SCN2A-205ENST00000480032 DOCK10Q96BY6 2186 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 KLK10O43240 276 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 IGKV3-11P04433 115 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 IL9P15248 144 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 KLKP1Q107X0 134 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 CYP4F30PQ9H0H9 118 aa3.39□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF497Q6ZNH5 498 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 ZPLD1Q8TCW7 415 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 LINC00467Q9BRT7 94 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 SIT1Q9Y3P8 196 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 MYO16Q9Y6X6 1858 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 EBLN2Q6P2I7 272 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 FAM19A3Q7Z5A8 133 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 TMEM14BQ9NUH8 114 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 A0A087X002 238 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 CFHR3Q02985 330 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 HIST2H2BCQ6DN03 193 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 HIST2H2BDQ6DRA6 164 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 FAM90A27PA6NNH2 459 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 GLI4P10075 376 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 FUSP35637 526 aaKnown RBP eCLIP3.38□□□□□ -1.87
SCN2A-205ENST00000480032 SBSPONQ8IVN8 264 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 TMUB1Q9BVT8 246 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 PTPRFP10586 1907 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 ACACAQ13085 2346 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 PLAC8L1A1L4L8 177 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 TMEM196Q5HYL7 178 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 ELANEP08246 267 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 TDRG1Q3Y452 100 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 CFHR4Q92496 578 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 PI4KAP42356 2102 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 FOCADQ5VW36 1801 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 CD55P08174 381 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 DEFB110Q30KQ9 67 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 ANKRD36A6QL64 1941 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 MT-ATP8P03928 68 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
SCN2A-205ENST00000480032 PTPRQQ9UMZ3 2332 aa3.37□□□□□ -1.87
SCN2A-205ENST00000480032 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
SCN2A-205ENST00000480032 IGHV1-45A0A0A0MS14 117 aa3.37□□□□□ -1.87
SCN2A-205ENST00000480032 A0A1B0GUS0 222 aa3.37□□□□□ -1.87
SCN2A-205ENST00000480032 TMEM89A2RUT3 159 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms