RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZNF329Q86UD4 541 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 NDUFA11Q86Y39 141 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 TTC9CQ8N5M4 171 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 OR52E5Q8NH55 327 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 ATP6V0BQ99437 205 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 NDUFA4L2Q9NRX3 87 aa4.81□□□□□ -1.64
SF3B1-209ENST00000479532 TET2Q6N021 2002 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-209ENST00000479532 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 IGLC7A0M8Q6 106 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 FAM223BA6NKX1 122 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF727A8MUV8 499 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF705FA8MVS1 300 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-209ENST00000479532 OR11H12B2RN74 326 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 TEX22C9J3V5 150 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 FAM90A26D6RGX4 464 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 C17orf112F2Z3M2 114 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 TRGV3P03979 118 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF705BP0CI00 300 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-209ENST00000479532 APELAP0DMC3 54 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 BCL2P10415 239 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 CD28P10747 220 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 PSMB8P28062 276 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 IZUMO4Q1ZYL8 232 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 MRGPRG-AS1Q2M3A8 158 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 IAH1Q2TAA2 248 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-209ENST00000479532 NMSQ5H8A3 153 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 C19orf35Q6ZS72 473 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 FAM223AQ8IWN6 122 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 TMEM217Q8N7C4 229 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 STPG4Q8N801 248 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 OR11H1Q8NG94 326 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 OR11H2Q8NH07 326 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 SPATA3Q8NHX4 192 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 CMTM2Q8TAZ6 248 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 MBD3L1Q8WWY6 194 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 USMG5Q96IX5 58 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF479Q96JC4 524 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 CITED1Q99966 193 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 SPXQ9BT56 116 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF586Q9NXT0 402 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 PXMP4Q9Y6I8 212 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 JMJD1CQ15652 2540 aa4.8□□□□□ -1.64
SF3B1-209ENST00000479532 INS-IGF2F8WCM5 200 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 H7BYZ3 331 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 M0QZ24 198 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 SCGB2A1O75556 95 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 BRI3O95415 125 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 MYOD1P15172 320 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 AREGP15514 252 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 TSPOP30536 169 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 RAB9AP51151 201 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 RPL23AP62750 156 aaKnown RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 SSBP2P81877 361 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 ATP5G2Q06055 141 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 NSUN5P1Q3KNT7 163 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 PDLIM3Q53GG5 364 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 SPINK9Q5DT21 86 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 ASPHD1Q5U4P2 390 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 GTF2H5Q6ZYL4 71 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 TMEM144Q7Z5S9 345 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 DEFB125Q8N687 156 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 NECAP1Q8NC96 275 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 OR4F17Q8NGA8 305 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 OR10W1Q8NGF6 305 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 EEF1AKMT3Q96AZ1 226 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 PINX1Q96BK5 328 aaKnown RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 OR4F4Q96R69 305 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 TXNDC17Q9BRA2 123 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 PSMG3Q9BT73 122 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 PEF1Q9UBV8 284 aaKnown RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 F11RQ9Y624 299 aaKnown RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 URGCP-MRPS24S4R325 110 aa4.79□□□□□ -1.64
SF3B1-209ENST00000479532 SETD2Q9BYW2 2564 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-209ENST00000479532 PLXNB1O43157 2135 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 TMEM189A5PLL7 270 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 CGB1A6NKQ9 187 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 E7EUB6 86 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 J3QR89 54 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 SYNGR2O43760 224 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 OR7C2O60412 319 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 HYPMO75409 117 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 MT-ND6P03923 174 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 NHLRC4P0CG21 123 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-209ENST00000479532 GALR1P47211 349 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-209ENST00000479532 RHOBP62745 196 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 SERF2P84101 59 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 OR10J3Q5JRS4 329 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 C10orf99Q6UWK7 81 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 NEGR1Q7Z3B1 354 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF491Q8N8L2 437 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 ZNF114Q8NC26 417 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms