RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 IFNA5P01569 189 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 CXCL3P19876 107 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 TCTAP57738 103 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 NHLH2Q02577 135 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 PPP1R1CQ8WVI7 109 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 NIPSNAP3BQ9BS92 247 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 NDUFAF3Q9BU61 184 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 NPCDR1Q9BY65 106 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 SMIM3Q9BZL3 60 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 AAMDCQ9H7C9 122 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 OR5AC2Q9NZP5 309 aa6.55□□□□□ -1.36
CMTM1-208ENST00000479381 YTHDF2Q9Y5A9 579 aaKnown RBP6.55□□□□□ -1.36
CMTM1-208ENST00000479381 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-208ENST00000479381 TSPOP30536 169 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 RPL29P47914 159 aaKnown RBP6.54□□□□□ -1.36
CMTM1-208ENST00000479381 GUK1Q16774 197 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 ZNF705AQ6ZN79 300 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-208ENST00000479381 CCDC28AQ8IWP9 274 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 TMEM37Q8WXS4 190 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 C17orf77Q96MU5 243 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 NEU1Q99519 415 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 ZNF331Q9NQX6 463 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-208ENST00000479381 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
CMTM1-208ENST00000479381 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 SLC17A3O00476 420 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 OR7C2O60412 319 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 CDKN1BP46527 198 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 MORN5Q5VZ52 161 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 C1orf158Q8N1D5 194 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 RPP25LQ8N5L8 163 aaKnown RBP6.53□□□□□ -1.36
CMTM1-208ENST00000479381 LYSTQ99698 3801 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 ATP5SQ99766 215 aa6.53□□□□□ -1.36
CMTM1-208ENST00000479381 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 PYYP10082 97 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 RPL12P30050 165 aaKnown RBP6.52□□□□□ -1.37
CMTM1-208ENST00000479381 LEPP41159 167 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 VWC2Q2TAL6 325 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 FFAR4Q5NUL3 377 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 FAM122CQ6P4D5 195 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 TMEM256Q8N2U0 113 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 RNF126Q9BV68 326 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 PARD6GQ9BYG4 376 aaPredicted RBP6.52□□□□□ -1.37
CMTM1-208ENST00000479381 MED28Q9H204 178 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 C11orf1Q9H5F2 150 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 MBD2Q9UBB5 411 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 DKK2Q9UBU2 259 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 RPH3ALQ9UNE2 315 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 RYR2Q92736 4967 aa6.52□□□□□ -1.37
CMTM1-208ENST00000479381 A0A1B0GVG6 124 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 SNURFLB1AK76 121 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 H3BQ15 152 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 MPC2O95563 127 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 OR10J4P0C629 311 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 IGLC2P0DOY2 106 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 HIST1H1EP10412 219 aaKnown RBP6.51□□□□□ -1.37
CMTM1-208ENST00000479381 CSN1S1P47710 185 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 TAS2R45P59539 299 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 UBE2L3P68036 154 aaKnown RBP6.51□□□□□ -1.37
CMTM1-208ENST00000479381 IL15RAQ13261 267 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 GCSAMLQ5JQS6 135 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 AMTNQ6UX39 209 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 MIR17HGQ75NE6 70 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 PAXXQ9BUH6 204 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 MRPL32Q9BYC8 188 aaKnown RBP6.51□□□□□ -1.37
CMTM1-208ENST00000479381 WDR61Q9GZS3 305 aaKnown RBP6.51□□□□□ -1.37
CMTM1-208ENST00000479381 OR51M1Q9H341 326 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 ZNF586Q9NXT0 402 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 PRELID1Q9Y255 219 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 HSPB11Q9Y547 144 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 ALG5Q9Y673 324 aa6.51□□□□□ -1.37
CMTM1-208ENST00000479381 PLECQ15149 4684 aaKnown RBP6.51□□□□□ -1.37
CMTM1-208ENST00000479381 TRAV12-3A0A0B4J271 114 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 A0A1W2PPV4 95 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
CMTM1-208ENST00000479381 PRAC2D3DTV9 90 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 F5H768 121 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 H0YIZ8 118 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 H7BYZ3 331 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 RGS13O14921 159 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 MRPS12O15235 138 aaKnown RBP6.5□□□□□ -1.37
CMTM1-208ENST00000479381 PFDN1O60925 122 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 PRM2P04554 102 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 P0DMU3 169 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 H2BFSP57053 126 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 TAS2R60P59551 318 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 ICAM4Q14773 271 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 TMEM78Q5T7P6 136 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 EXOC3-AS1Q8N2X6 119 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms