RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 FXYD5Q96DB9 178 aa14.9□□□□□ -0.02
VARS-224ENST00000479051 C11orf68Q9H3H3 251 aaKnown RBP14.9□□□□□ -0.02
VARS-224ENST00000479051 GOLT1BQ9Y3E0 138 aa14.9□□□□□ -0.02
VARS-224ENST00000479051 BOLA2-SMG1P6H3BVE0 249 aa14.89□□□□□ -0.03
VARS-224ENST00000479051 NDUFB4O95168 129 aa14.89□□□□□ -0.03
VARS-224ENST00000479051 CDC34P49427 236 aaPredicted RBP14.89□□□□□ -0.03
VARS-224ENST00000479051 AMTNQ6UX39 209 aa14.89□□□□□ -0.03
VARS-224ENST00000479051 PQLC2Q6ZP29 291 aa14.89□□□□□ -0.03
VARS-224ENST00000479051 ARPC5LQ9BPX5 153 aa14.89□□□□□ -0.03
VARS-224ENST00000479051 A0A0D9SG52 128 aa14.88□□□□□ -0.03
VARS-224ENST00000479051 SPINK13Q1W4C9 94 aa14.88□□□□□ -0.03
VARS-224ENST00000479051 KCNRGQ8N5I3 272 aa14.88□□□□□ -0.03
VARS-224ENST00000479051 SH3BGRL3Q9H299 93 aa14.88□□□□□ -0.03
VARS-224ENST00000479051 INSP01308 110 aa14.87□□□□□ -0.03
VARS-224ENST00000479051 ICAM4Q14773 271 aa14.87□□□□□ -0.03
VARS-224ENST00000479051 LYPD1Q8N2G4 141 aa14.87□□□□□ -0.03
VARS-224ENST00000479051 IGF2BP2-AS1Q96M15 143 aa14.87□□□□□ -0.03
VARS-224ENST00000479051 X6R8D5 127 aa14.87□□□□□ -0.03
VARS-224ENST00000479051 IGHV3OR16-12A0A075B7B8 117 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 KANTRA0A1W2PQU2 76 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 M0R2Z0 102 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 TSPOP30536 169 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 ZNF705AQ6ZN79 300 aaPredicted RBP14.86□□□□□ -0.03
VARS-224ENST00000479051 EXOC3-AS1Q8N2X6 119 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 OR11H4Q8NGC9 324 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 ZNF503Q96F45 646 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 TMEM208Q9BTX3 173 aa14.86□□□□□ -0.03
VARS-224ENST00000479051 ACTR3CQ9C0K3 210 aaPredicted RBP14.86□□□□□ -0.03
VARS-224ENST00000479051 IGHV4-28A0A0C4DH34 117 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 SMIM9A6NGZ8 99 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 PRAC2D3DTV9 90 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 M0R3E3 92 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 CSN1S1P47710 185 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 AKR1C8PQ5T2L2 129 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 ZFAND6Q6FIF0 208 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 Q8NAQ8 132 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 PHYHIPLQ96FC7 376 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 ST6GAL2Q96JF0 529 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 NEU1Q99519 415 aa14.85□□□□□ -0.03
VARS-224ENST00000479051 PRB4P10163 310 aaPredicted RBP14.84□□□□□ -0.03
VARS-224ENST00000479051 CDKN1BP46527 198 aa14.84□□□□□ -0.03
VARS-224ENST00000479051 RANP62826 216 aaKnown RBP14.84□□□□□ -0.03
VARS-224ENST00000479051 CASC10Q5T4H9 136 aa14.84□□□□□ -0.03
VARS-224ENST00000479051 TCTE3Q8IZS6 198 aa14.84□□□□□ -0.03
VARS-224ENST00000479051 RPP25LQ8N5L8 163 aaKnown RBP14.84□□□□□ -0.03
VARS-224ENST00000479051 RAB24Q969Q5 203 aa14.84□□□□□ -0.03
VARS-224ENST00000479051 CYTL1Q9NRR1 136 aa14.84□□□□□ -0.03
VARS-224ENST00000479051 NPIPB6E9PJ23 425 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 DEFB4AO15263 64 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 HMGB3O15347 200 aaKnown RBP14.83□□□□□ -0.04
VARS-224ENST00000479051 PFDN1O60925 122 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 HBE1P02100 147 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 STAG3L2P0CL84 134 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 STAG3L3P0CL85 134 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 FAM74A1Q5RGS3 127 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 ODF3Q96PU9 254 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 Q9H3A6 140 aa14.83□□□□□ -0.04
VARS-224ENST00000479051 hCG_2014768A0A024R1R8 64 aa14.82□□□□□ -0.04
VARS-224ENST00000479051 CXorf65A6NEN9 183 aa14.82□□□□□ -0.04
VARS-224ENST00000479051 BCL2L11O43521 198 aa14.82□□□□□ -0.04
VARS-224ENST00000479051 EIF3GO75821 320 aaKnown RBP eCLIP14.82□□□□□ -0.04
VARS-224ENST00000479051 ARL14EPLP0DKL9 152 aa14.82□□□□□ -0.04
VARS-224ENST00000479051 LEPP41159 167 aa14.82□□□□□ -0.04
VARS-224ENST00000479051 EIF5AP63241 154 aaKnown RBP14.82□□□□□ -0.04
VARS-224ENST00000479051 TRAV12-2A0A075B6T6 113 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 TMEM189A5PLL7 270 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 CXorf1O96002 111 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 RBMY1A1P0DJD3 496 aaKnown RBP14.81□□□□□ -0.04
VARS-224ENST00000479051 RBMY1CP0DJD4 496 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 RBMY1FQ15415 496 aaKnown RBP14.81□□□□□ -0.04
VARS-224ENST00000479051 AKAP14Q86UN6 197 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 BAP18Q8IXM2 172 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 C1orf158Q8N1D5 194 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 TMEM256Q8N2U0 113 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 C11orf45Q8TAV5 145 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 RXFP4Q8TDU9 374 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 LINC00477Q96M19 166 aa14.81□□□□□ -0.04
VARS-224ENST00000479051 ZNF471Q9BX82 626 aaPredicted RBP14.81□□□□□ -0.04
VARS-224ENST00000479051 CRXO43186 299 aaPredicted RBP14.8□□□□□ -0.04
VARS-224ENST00000479051 PMS2P11Q13670 270 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 RRN3P1Q2M238 152 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 TMEM78Q5T7P6 136 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 CMTM2Q8TAZ6 248 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 OTORQ9NRC9 128 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 TMEM167BQ9NRX6 74 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 DNAH7Q8WXX0 4024 aa14.8□□□□□ -0.04
VARS-224ENST00000479051 CTXND1A0A1B0GTU2 59 aa14.79□□□□□ -0.04
VARS-224ENST00000479051 CT45A10P0DMU9 189 aa14.79□□□□□ -0.04
VARS-224ENST00000479051 GCHFRP30047 84 aa14.79□□□□□ -0.04
VARS-224ENST00000479051 C20orf144Q9BQM9 153 aa14.79□□□□□ -0.04
VARS-224ENST00000479051 IGKV2-40A0A087WW87 121 aaPredicted RBP14.78□□□□□ -0.04
VARS-224ENST00000479051 PGPA6NDG6 321 aa14.78□□□□□ -0.04
VARS-224ENST00000479051 IGKV2D-40P01614 121 aaPredicted RBP14.78□□□□□ -0.04
VARS-224ENST00000479051 C1QBP02746 253 aa14.78□□□□□ -0.04
VARS-224ENST00000479051 C9orf47Q6ZRZ4 202 aa14.78□□□□□ -0.04
VARS-224ENST00000479051 TMUB2Q71RG4 321 aa14.78□□□□□ -0.04
VARS-224ENST00000479051 IQCF2Q8IXL9 164 aa14.78□□□□□ -0.04
VARS-224ENST00000479051 LINC01587Q99440 93 aa14.78□□□□□ -0.04
VARS-224ENST00000479051 NUPR2A6NF83 97 aa14.77□□□□□ -0.05
VARS-224ENST00000479051 SEC11BP0C7V7 166 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms