RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 OR11H12B2RN74 326 aa10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 BCL2P10415 239 aa10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 CMC4P56277 68 aaPredicted RBP10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 DEFB1P60022 68 aa10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 RPH3ALQ9UNE2 315 aa10.15□□□□□ -0.78
SMARCAL1-211ENST00000479008 LOC102723971A0A1B0GUV8 181 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 CSN1S1P47710 185 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 GNG5P63218 68 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 PMS2P11Q13670 270 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 ZNF124Q15973 351 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 APRG1Q8IVJ8 170 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 NKX6-2Q9C056 277 aaPredicted RBP10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 WFDC10AQ9H1F0 79 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
SMARCAL1-211ENST00000479008 RBFOX3A6NFN3 312 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 C11orf94C9JXX5 98 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 F6UB75 175 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 C5orf17Q8NAS9 161 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 RXFP4Q8TDU9 374 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 RARRES2Q99969 163 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 FAM110AQ9BQ89 295 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
SMARCAL1-211ENST00000479008 KNCNA6PVL3 124 aa10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 TAGLN2P37802 199 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 CCDC28AQ8IWP9 274 aa10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 Q8N1Y9 231 aa10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 FAM210AQ96ND0 272 aa10.12□□□□□ -0.79
SMARCAL1-211ENST00000479008 IGKV2-40A0A087WW87 121 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 DIRC3C9JPN6 131 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 IGKV2D-40P01614 121 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 TCRAP04437 139 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 ZNF705DP0CH99 300 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 ZNF705BP0CI00 300 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 MEF2BQ02080 365 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 HIST1H1AQ02539 215 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 ZNF506Q5JVG8 444 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 ACTL10Q5JWF8 245 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 DEFB125Q8N687 156 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 OR8A1Q8NGG7 326 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 TXNDC17Q9BRA2 123 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 EPDR1Q9UM22 224 aa10.11□□□□□ -0.79
SMARCAL1-211ENST00000479008 A0A0J9YX75 114 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 PEX7O00628 323 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 GOLT1AQ6ZVE7 132 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 ARL6IP6Q8N6S5 226 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 TCEAL7Q9BRU2 100 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
SMARCAL1-211ENST00000479008 DNAH3Q8TD57 4116 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 F6UZH7 168 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 ERCC8Q13216 396 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 CYB561D1Q8N8Q1 229 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 OR10J6PQ8NGY7 276 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 HIST1H2BAQ96A08 127 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 SRD5A3Q9H8P0 318 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
SMARCAL1-211ENST00000479008 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 SERTM2A0A1B0GWG4 89 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 H3BMM0 161 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 K7EQM0 130 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 PDE6DO43924 150 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 DUSP14O95147 198 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 AKR1C3P42330 323 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 CNN1P51911 297 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 SRSF3P84103 164 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 STHQ8IWL8 128 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 OR4B1Q8NGF8 309 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 SGK494Q96LW2 274 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 VGLL1Q99990 258 aa10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-211ENST00000479008 TRAV8-1A0A0A6YYK1 113 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 NPIPB6E9PJ23 425 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 PEA15Q15121 130 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 C11orf52Q96A22 123 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 LINC00479Q96M42 142 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 MED9Q9NWA0 146 aa10.07□□□□□ -0.8
SMARCAL1-211ENST00000479008 TRAV34A0A0B4J273 112 aa10.06□□□□□ -0.8
SMARCAL1-211ENST00000479008 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
SMARCAL1-211ENST00000479008 LINC00862A6NCI5 91 aa10.06□□□□□ -0.8
SMARCAL1-211ENST00000479008 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms