RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 SNRPGP15A8MWD9 76 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 CCSO14618 274 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 CA1P00915 261 aaPredicted RBP4.59□□□□□ -1.67
HOXB3-209ENST00000478644 RPL35AP18077 110 aaKnown RBP4.59□□□□□ -1.67
HOXB3-209ENST00000478644 ID1P41134 155 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 PAX9P55771 341 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 IL15RAQ13261 267 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 SPANXN5Q5MJ07 72 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 PAPPA-AS1Q5QFB9 102 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 TMEM14EPQ6UXP3 125 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 ACY3Q96HD9 319 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 SLC35E1Q96K37 410 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 FAM210BQ96KR6 192 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 C2orf50Q96LR7 162 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 TRGV9Q99603 122 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 PSENENQ9NZ42 101 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 GSKIPQ9P0R6 139 aa4.59□□□□□ -1.67
HOXB3-209ENST00000478644 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.68
HOXB3-209ENST00000478644 C7orf66A4D0T2 115 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 FBLL1A6NHQ2 334 aaKnown RBP4.58□□□□□ -1.68
HOXB3-209ENST00000478644 PMS2P5A8MQ11 134 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 FNDC10F2Z333 226 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 INMT-MINDY4F8WBC2 141 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 K7EQG2 157 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 SSSCA1O60232 199 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 PSG1P11464 419 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 P2RY1P47900 373 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 PLP1P60201 277 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 C1orf194Q5T5A4 169 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 OR8G2PQ6IF36 304 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 TMEM144Q7Z5S9 345 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 APRG1Q8IVJ8 170 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 OR51G1Q8NGK1 321 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 GGACTQ9BVM4 153 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 C11orf1Q9H5F2 150 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 RABAC1Q9UI14 185 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 RCL1Q9Y2P8 373 aaKnown RBP4.58□□□□□ -1.68
HOXB3-209ENST00000478644 SELENOKQ9Y6D0 94 aa4.58□□□□□ -1.68
HOXB3-209ENST00000478644 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
HOXB3-209ENST00000478644 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 IGKV1OR2-108A0A075B7D4 117 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 IGHV3OR16-13A0A075B7E8 117 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 IGHV3-49A0A0A0MS15 119 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 IGHV3-74A0A0B4J1X5 117 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 TRAV10A0A0B4J240 114 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 ZFP92A6NM28 416 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 ZNF705EA8MWA4 302 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-209ENST00000478644 H3BP45 60 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 K7EPK0 472 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 RS1O15537 224 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 BUB3O43684 328 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 DEDDO75618 318 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 IL4P05112 153 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 TFPI2P48307 235 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 MEOX2P50222 304 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 DEFB131AP59861 70 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 B2MP61769 119 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 ZNF90Q03938 601 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 GSG1LQ6UXU4 331 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 LINC00336Q6ZUF6 198 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 ACOT7LQ6ZUV0 252 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 UHRF2Q96PU4 802 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 RNF126Q9BV68 326 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 NRN1Q9NPD7 142 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 PAIP2BQ9ULR5 123 aaKnown RBP4.57□□□□□ -1.68
HOXB3-209ENST00000478644 DNAH1Q9P2D7 4330 aa4.57□□□□□ -1.68
HOXB3-209ENST00000478644 IGHV3-66A0A0C4DH42 116 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 PTTG1O95997 202 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 P0DMU3 169 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 FAM231AP0DMU4 169 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 FAM231CP0DMU5 169 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 PVALBP20472 110 aaPredicted RBP4.56□□□□□ -1.68
HOXB3-209ENST00000478644 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
HOXB3-209ENST00000478644 CYCSP99999 105 aaKnown RBP4.56□□□□□ -1.68
HOXB3-209ENST00000478644 TRPT1Q86TN4 253 aaKnown RBP4.56□□□□□ -1.68
HOXB3-209ENST00000478644 SLC7A5P1Q8MH63 180 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 OR10P1Q8NGE3 313 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 DCANP1Q8TF63 244 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 GPR82Q96P67 336 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 NMES1Q9C002 83 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 NPVFQ9HCQ7 196 aa4.56□□□□□ -1.68
HOXB3-209ENST00000478644 IGKV3-7A0A075B6H7 116 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 CCNKO75909 580 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 AMBPP02760 352 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 METTL15P1P0C7V9 234 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 PSMB3P49720 205 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 SULT1A1P50225 295 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 SELENOTP62341 195 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 EWSR1Q01844 656 aaKnown RBP eCLIP4.55□□□□□ -1.68
HOXB3-209ENST00000478644 AKR1C1Q04828 323 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 ARL16Q0P5N6 197 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 OXA1LQ15070 435 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 Q6ZRG5 221 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 CYP2G1PQ6ZSU1 146 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 PBDC1Q9BVG4 233 aa4.55□□□□□ -1.68
HOXB3-209ENST00000478644 LYRM2Q9NU23 88 aaPredicted RBP4.55□□□□□ -1.68
HOXB3-209ENST00000478644 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
HOXB3-209ENST00000478644 IGHV4-28A0A0C4DH34 117 aa4.54□□□□□ -1.68
HOXB3-209ENST00000478644 IGLV5-39A0A0G2JS06 123 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms