RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 YTHDF2Q9Y5A9 579 aaKnown RBP13.34□□□□□ -0.27
SREBF1-212ENST00000478616 FAT2Q9NYQ8 4349 aa13.34□□□□□ -0.27
SREBF1-212ENST00000478616 IGHV4-4A0A075B6R2 117 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 MPDU1O75352 247 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 CYCSP99999 105 aaKnown RBP13.33□□□□□ -0.28
SREBF1-212ENST00000478616 MIR17HGQ75NE6 70 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 S100A7AQ86SG5 101 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 PFDN5Q99471 154 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 SLC25A31Q9H0C2 315 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 TMEM14CQ9P0S9 112 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 HSPB11Q9Y547 144 aa13.33□□□□□ -0.28
SREBF1-212ENST00000478616 TRBV19A0A075B6N1 114 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 DEFB131BA0A096LNP1 70 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 M0R3E3 92 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 AMBPP02760 352 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 LRRC20Q8TCA0 184 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 ZNF503Q96F45 646 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
SREBF1-212ENST00000478616 TMEM189A5PLL7 270 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 INSP01308 110 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 HBE1P02100 147 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 RLN2P04090 185 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 SPART-AS1P0CW21 52 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 CT45A10P0DMU9 189 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 TCTAP57738 103 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 RRN3P1Q2M238 152 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 RNF24Q9Y225 148 aa13.31□□□□□ -0.28
SREBF1-212ENST00000478616 ZNF253O75346 499 aa13.3□□□□□ -0.28
SREBF1-212ENST00000478616 RHOBP62745 196 aa13.3□□□□□ -0.28
SREBF1-212ENST00000478616 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 NPIPB6E9PJ23 425 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 HIST1H1EP10412 219 aaKnown RBP13.29□□□□□ -0.28
SREBF1-212ENST00000478616 FCN2Q15485 313 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 GUK1Q16774 197 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 GFI1BQ5VTD9 330 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 ATP5SQ99766 215 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 SMIM3Q9BZL3 60 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 MED28Q9H204 178 aa13.29□□□□□ -0.28
SREBF1-212ENST00000478616 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
SREBF1-212ENST00000478616 TSPOP30536 169 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 CDKN1BP46527 198 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 Q5BKY6 102 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 FXYD5Q96DB9 178 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 FAM19A4Q96LR4 140 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 NIPSNAP3BQ9BS92 247 aa13.28□□□□□ -0.28
SREBF1-212ENST00000478616 RPL12P30050 165 aaKnown RBP13.27□□□□□ -0.29
SREBF1-212ENST00000478616 ERCC8Q13216 396 aa13.26□□□□□ -0.29
SREBF1-212ENST00000478616 MRPL53Q96EL3 112 aaKnown RBP13.26□□□□□ -0.29
SREBF1-212ENST00000478616 TMEM208Q9BTX3 173 aa13.26□□□□□ -0.29
SREBF1-212ENST00000478616 HECTD4Q9Y4D8 3996 aa13.26□□□□□ -0.29
SREBF1-212ENST00000478616 PDE6HQ13956 83 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 RNASE8Q8TDE3 154 aaKnown RBP13.25□□□□□ -0.29
SREBF1-212ENST00000478616 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 PHYHIPLQ96FC7 376 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 ODF3Q96PU9 254 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 LINC01587Q99440 93 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 AGPAT4-IT1Q9H0P7 198 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 FUT9Q9Y231 359 aa13.25□□□□□ -0.29
SREBF1-212ENST00000478616 TAS2R60P59551 318 aa13.24□□□□□ -0.29
SREBF1-212ENST00000478616 Q6ZQT7 251 aa13.24□□□□□ -0.29
SREBF1-212ENST00000478616 OR10J4P0C629 311 aa13.23□□□□□ -0.29
SREBF1-212ENST00000478616 NBEAP1P0C6P0 100 aa13.23□□□□□ -0.29
SREBF1-212ENST00000478616 PRR9Q5T870 116 aa13.23□□□□□ -0.29
SREBF1-212ENST00000478616 TMEM256Q8N2U0 113 aa13.23□□□□□ -0.29
SREBF1-212ENST00000478616 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
SREBF1-212ENST00000478616 MRPL32Q9BYC8 188 aaKnown RBP13.23□□□□□ -0.29
SREBF1-212ENST00000478616 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
SREBF1-212ENST00000478616 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-212ENST00000478616 LYRM9A8MSI8 78 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 G3V3Q6 166 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-212ENST00000478616 ICAM4Q14773 271 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 FFAR4Q5NUL3 377 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 Q6ZNX1 250 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 LINC00612Q8N6U2 182 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 VGLL1Q99990 258 aa13.22□□□□□ -0.29
SREBF1-212ENST00000478616 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 KLLNB2CW77 178 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 H7BYZ3 331 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 J3KRW8 73 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 PET100P0DJ07 73 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 DAD1P61803 113 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 CD300CQ08708 224 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 TMEM88Q6PEY1 159 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 C9orf47Q6ZRZ4 202 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 RNF141Q8WVD5 230 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 C20orf144Q9BQM9 153 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 PAXXQ9BUH6 204 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 PPP1R14DQ9NXH3 145 aa13.21□□□□□ -0.29
SREBF1-212ENST00000478616 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
SREBF1-212ENST00000478616 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-212ENST00000478616 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-212ENST00000478616 HTN3P15516 51 aa13.2□□□□□ -0.3
SREBF1-212ENST00000478616 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
SREBF1-212ENST00000478616 NDUFAF3Q9BU61 184 aa13.2□□□□□ -0.3
SREBF1-212ENST00000478616 PRELID1Q9Y255 219 aa13.2□□□□□ -0.3
SREBF1-212ENST00000478616 TIMM9Q9Y5J7 89 aa13.2□□□□□ -0.3
SREBF1-212ENST00000478616 PKD1P98161 4303 aa13.19□□□□□ -0.3
SREBF1-212ENST00000478616 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms