RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 ATP5G3P48201 142 aa16.03■□□□□ 0.16
C9orf3-216ENST00000478603 BAXQ07812 192 aa16.03■□□□□ 0.16
C9orf3-216ENST00000478603 IL15RAQ13261 267 aa16.03■□□□□ 0.16
C9orf3-216ENST00000478603 VWC2Q2TAL6 325 aa16.03■□□□□ 0.16
C9orf3-216ENST00000478603 RNASE8Q8TDE3 154 aaKnown RBP16.03■□□□□ 0.16
C9orf3-216ENST00000478603 NOP10Q9NPE3 64 aaKnown RBP16.03■□□□□ 0.16
C9orf3-216ENST00000478603 LYRM2Q9NU23 88 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-216ENST00000478603 TIMM8BQ9Y5J9 83 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-216ENST00000478603 PXMP4Q9Y6I8 212 aa16.03■□□□□ 0.16
C9orf3-216ENST00000478603 H7BYZ3 331 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 J3KRW8 73 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 NUDT3O95989 172 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 SULT1A1P50225 295 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 GFI1BQ5VTD9 330 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 TMEM252Q8N6L7 170 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 OR1L4Q8NGR5 311 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 SLC39A9Q9NUM3 307 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 ZNF586Q9NXT0 402 aa16.02■□□□□ 0.16
C9orf3-216ENST00000478603 DYNC1H1Q14204 4646 aaKnown RBP16.02■□□□□ 0.15
C9orf3-216ENST00000478603 CBY3A6NI87 242 aa16.01■□□□□ 0.15
C9orf3-216ENST00000478603 TMEM263Q8WUH6 116 aaKnown RBP16.01■□□□□ 0.15
C9orf3-216ENST00000478603 PFDN5Q99471 154 aa16.01■□□□□ 0.15
C9orf3-216ENST00000478603 ATG101Q9BSB4 218 aa16.01■□□□□ 0.15
C9orf3-216ENST00000478603 PKD1P98161 4303 aa16■□□□□ 0.15
C9orf3-216ENST00000478603 S100A11P31949 105 aa16■□□□□ 0.15
C9orf3-216ENST00000478603 RPL29P47914 159 aaKnown RBP16■□□□□ 0.15
C9orf3-216ENST00000478603 ZNF493Q6ZR52 646 aa16■□□□□ 0.15
C9orf3-216ENST00000478603 CT45A10P0DMU9 189 aa15.99■□□□□ 0.15
C9orf3-216ENST00000478603 FGF7P21781 194 aa15.99■□□□□ 0.15
C9orf3-216ENST00000478603 GUK1Q16774 197 aa15.99■□□□□ 0.15
C9orf3-216ENST00000478603 STX12Q86Y82 276 aa15.99■□□□□ 0.15
C9orf3-216ENST00000478603 C20orf144Q9BQM9 153 aa15.99■□□□□ 0.15
C9orf3-216ENST00000478603 DNAH11Q96DT5 4516 aa15.99■□□□□ 0.15
C9orf3-216ENST00000478603 HBG1P69891 147 aa15.98■□□□□ 0.15
C9orf3-216ENST00000478603 HBG2P69892 147 aa15.98■□□□□ 0.15
C9orf3-216ENST00000478603 MZT2BQ6NZ67 158 aa15.98■□□□□ 0.15
C9orf3-216ENST00000478603 GPN1Q9HCN4 374 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-216ENST00000478603 NPIPB6E9PJ23 425 aa15.97■□□□□ 0.15
C9orf3-216ENST00000478603 FAM3BP58499 235 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-216ENST00000478603 C1orf134Q5TEV5 83 aa15.97■□□□□ 0.15
C9orf3-216ENST00000478603 RNF141Q8WVD5 230 aa15.97■□□□□ 0.15
C9orf3-216ENST00000478603 TRAV12-3A0A0B4J271 114 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 M0R3E3 92 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 LEPP41159 167 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 GCSAMLQ5JQS6 135 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 SOHLH1Q5JUK2 328 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 CCDC28AQ8IWP9 274 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 CHAC2Q8WUX2 184 aa15.96■□□□□ 0.15
C9orf3-216ENST00000478603 TRBV19A0A075B6N1 114 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 ZNF253O75346 499 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 SIX6O95475 246 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 PYYP10082 97 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 ERCC8Q13216 396 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 ASAH1Q13510 395 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 ATP6V1FQ16864 119 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 ZNRF2Q8NHG8 242 aa15.95■□□□□ 0.14
C9orf3-216ENST00000478603 NDUFB4O95168 129 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 NHLH2Q02577 135 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 LINC00612Q8N6U2 182 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 ODF3Q96PU9 254 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 NPCDR1Q9BY65 106 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 TMEM14CQ9P0S9 112 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 LINC00588Q9Y4M8 146 aa15.94■□□□□ 0.14
C9orf3-216ENST00000478603 GAGE12BA1L429 117 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 GAGE7O76087 117 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 GAGE12FP0CL80 117 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 GAGE12GP0CL81 117 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 GAGE12IP0CL82 117 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 OR5I1Q13606 314 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 THAP6Q8TBB0 222 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 BLNKQ8WV28 456 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 S100ZQ8WXG8 99 aa15.93■□□□□ 0.14
C9orf3-216ENST00000478603 SNURFLB1AK76 121 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 MED14OSP0DP75 135 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 HIST1H1EP10412 219 aaKnown RBP15.92■□□□□ 0.14
C9orf3-216ENST00000478603 CCL18P55774 89 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 LINC00299Q6ZSB3 139 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 ENKURQ8TC29 256 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 MRPL53Q96EL3 112 aaKnown RBP15.92■□□□□ 0.14
C9orf3-216ENST00000478603 TIMM9Q9Y5J7 89 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 MUC4Q99102 2169 aa15.92■□□□□ 0.14
C9orf3-216ENST00000478603 TRAV26-1A0A087WT03 109 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 NBDYA0A0U1RRE5 68 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 MPDU1O75352 247 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 RLN2P04090 185 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 HOXA5P20719 270 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 CLINT1Q14677 625 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 LRRC37A5PQ49AS3 106 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 EXOC3-AS1Q8N2X6 119 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 OR5C1Q8NGR4 320 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 SLC25A2Q9BXI2 301 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 OR5AC2Q9NZP5 309 aa15.91■□□□□ 0.14
C9orf3-216ENST00000478603 A0A0J9YY99 117 aa15.9■□□□□ 0.14
C9orf3-216ENST00000478603 ZNF575Q86XF7 245 aa15.9■□□□□ 0.14
C9orf3-216ENST00000478603 GNPNAT1Q96EK6 184 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-216ENST00000478603 PYGO2Q9BRQ0 406 aa15.9■□□□□ 0.14
C9orf3-216ENST00000478603 AGPAT4-IT1Q9H0P7 198 aa15.9■□□□□ 0.14
C9orf3-216ENST00000478603 C7orf71A4D174 169 aa15.89■□□□□ 0.13
C9orf3-216ENST00000478603 CD300CQ08708 224 aa15.89■□□□□ 0.13
C9orf3-216ENST00000478603 PDE6HQ13956 83 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms