RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RBP4P02753 201 aa7.75□□□□□ -1.17
COL13A1-207ENST00000478219 EVI2AP22794 236 aa7.75□□□□□ -1.17
COL13A1-207ENST00000478219 LYZP61626 148 aa7.75□□□□□ -1.17
COL13A1-207ENST00000478219 FAM216BQ8N7L0 139 aa7.75□□□□□ -1.17
COL13A1-207ENST00000478219 CARD19Q96LW7 228 aa7.75□□□□□ -1.17
COL13A1-207ENST00000478219 C1QTNF4Q9BXJ3 329 aa7.75□□□□□ -1.17
COL13A1-207ENST00000478219 PRSS29PA6NIE9 313 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 FAM90A27PA6NNH2 459 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 B5MCH6 92 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 IGKV3-15P01624 115 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 KLRD1Q13241 179 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 MRGPRG-AS1Q2M3A8 158 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 KLF17Q5JT82 389 aaPredicted RBP7.74□□□□□ -1.17
COL13A1-207ENST00000478219 CFAP126Q5VTH2 177 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 C8orf46Q8TAG6 207 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 OR11H12B2RN74 326 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 CRYGCP07315 174 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 ZGRF1Q86YA3 2104 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 OR11H1Q8NG94 326 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 OR11H2Q8NH07 326 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 CCL13Q99616 98 aa7.74□□□□□ -1.17
COL13A1-207ENST00000478219 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
COL13A1-207ENST00000478219 A0A1B0GW15 77 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 INS-IGF2F8WCM5 200 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 IGLV2-23P01705 113 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 MEOX1P50221 254 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 TMEM167AQ8TBQ9 72 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 SLC25A39Q9BZJ4 359 aaPredicted RBP7.73□□□□□ -1.17
COL13A1-207ENST00000478219 TMEM133Q9H2Q1 129 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 CTSZQ9UBR2 303 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 SPRY3O43610 288 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 NHLRC4P0CG21 123 aaPredicted RBP7.73□□□□□ -1.17
COL13A1-207ENST00000478219 TWIST1Q15672 202 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 ZFP2Q6ZN57 461 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 ZNF833PQ6ZTB9 187 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 TRGV9Q99603 122 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 UFC1Q9Y3C8 167 aa7.73□□□□□ -1.17
COL13A1-207ENST00000478219 NTN3O00634 580 aaPredicted RBP7.72□□□□□ -1.17
COL13A1-207ENST00000478219 LHBP01229 141 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 SRSF1Q07955 248 aaKnown RBP eCLIP7.72□□□□□ -1.17
COL13A1-207ENST00000478219 Q6AWC8 147 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 SIGLEC15Q6ZMC9 328 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 TMEM158Q8WZ71 300 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 RNF185Q96GF1 192 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 HIGD1AQ9Y241 93 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 K7ESF4 209 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 SH2D1AO60880 128 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 DPM2O94777 84 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 CCL3L1P16619 93 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 CXCL12P48061 93 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 SUB1P53999 127 aaKnown RBP eCLIP7.72□□□□□ -1.17
COL13A1-207ENST00000478219 CNEP1R1Q8N9A8 125 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 TMEM75Q8N9X5 138 aa7.72□□□□□ -1.17
COL13A1-207ENST00000478219 TRBV19A0A075B6N1 114 aa7.71□□□□□ -1.17
COL13A1-207ENST00000478219 IGHV3-72A0A0B4J1Y9 119 aa7.71□□□□□ -1.17
COL13A1-207ENST00000478219 IGHV1-18A0A0C4DH31 117 aa7.71□□□□□ -1.17
COL13A1-207ENST00000478219 TMEM105Q8N8V8 129 aa7.71□□□□□ -1.17
COL13A1-207ENST00000478219 C1orf162Q8NEQ5 155 aaPredicted RBP7.71□□□□□ -1.17
COL13A1-207ENST00000478219 GAFA1Q96PS6 74 aa7.71□□□□□ -1.17
COL13A1-207ENST00000478219 RP1L1Q8IWN7 2480 aaPredicted RBP7.71□□□□□ -1.18
COL13A1-207ENST00000478219 EGR2P11161 476 aaPredicted RBP7.71□□□□□ -1.18
COL13A1-207ENST00000478219 HERV-K104P63124 156 aa7.71□□□□□ -1.18
COL13A1-207ENST00000478219 NDUFA3O95167 84 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 CNTFRP26992 372 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 PSMB2P49721 201 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
COL13A1-207ENST00000478219 LAMA5O15230 3695 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 TRBV6-1A0A0K0K1D8 114 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 SHISA9B4DS77 424 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 LAMTOR5O43504 91 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 FCN3O75636 299 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 GAGE5Q13069 117 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 GAGE6Q13070 117 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 Q6ZT83 130 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 SIT1Q9Y3P8 196 aa7.7□□□□□ -1.18
COL13A1-207ENST00000478219 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
COL13A1-207ENST00000478219 MALRD1Q5VYJ5 2156 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 PATE3B3GLJ2 98 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 TGFAP01135 160 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 OR4C13Q8NGP0 309 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 OR10X1Q8NGY0 326 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 Q8TAT8 98 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 MAP1LC3AQ9H492 121 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 NGBQ9NPG2 151 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 TMEM14CQ9P0S9 112 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 IGKV2-40A0A087WW87 121 aaPredicted RBP7.69□□□□□ -1.18
COL13A1-207ENST00000478219 LINC01549A6NIU2 74 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 IGKV2D-40P01614 121 aaPredicted RBP7.69□□□□□ -1.18
COL13A1-207ENST00000478219 EFNA4P52798 201 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 PRB3Q04118 309 aaPredicted RBP7.69□□□□□ -1.18
COL13A1-207ENST00000478219 SRSF6Q13247 344 aaKnown RBP7.69□□□□□ -1.18
COL13A1-207ENST00000478219 AJUBAQ96IF1 538 aa7.69□□□□□ -1.18
COL13A1-207ENST00000478219 RALYQ9UKM9 306 aaKnown RBP7.69□□□□□ -1.18
COL13A1-207ENST00000478219 SVEP1Q4LDE5 3571 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms