RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 MRAPQ8TCY5 172 aa8.48□□□□□ -1.05
CBWD3-206ENST00000478048 PHYHIPLQ96FC7 376 aa8.48□□□□□ -1.05
CBWD3-206ENST00000478048 SRD5A3Q9H8P0 318 aa8.48□□□□□ -1.05
CBWD3-206ENST00000478048 KNCNA6PVL3 124 aa8.47□□□□□ -1.05
CBWD3-206ENST00000478048 GCHFRP30047 84 aa8.47□□□□□ -1.05
CBWD3-206ENST00000478048 GUK1Q16774 197 aa8.47□□□□□ -1.05
CBWD3-206ENST00000478048 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
CBWD3-206ENST00000478048 SLC50A1Q9BRV3 221 aa8.47□□□□□ -1.05
CBWD3-206ENST00000478048 TMPRSS5Q9H3S3 457 aa8.47□□□□□ -1.05
CBWD3-206ENST00000478048 MAP1LC3B2A6NCE7 125 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.05
CBWD3-206ENST00000478048 F6UB75 175 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 SULT1A2P50226 295 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 CMC4P56277 68 aaPredicted RBP8.46□□□□□ -1.05
CBWD3-206ENST00000478048 GDF5OSQ5U4N7 250 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 EXOC3-AS1Q8N2X6 119 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 MAP1LC3BQ9GZQ8 125 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 TUBA4BQ9H853 241 aa8.46□□□□□ -1.05
CBWD3-206ENST00000478048 A0A1B0GV50 99 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 RBMY1BA6NDE4 496 aaKnown RBP8.46□□□□□ -1.06
CBWD3-206ENST00000478048 RBMY1EA6NEQ0 496 aaKnown RBP8.46□□□□□ -1.06
CBWD3-206ENST00000478048 M0R3E3 92 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 ZNF253O75346 499 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 CXorf1O96002 111 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 RBMY1DP0C7P1 496 aaKnown RBP8.46□□□□□ -1.06
CBWD3-206ENST00000478048 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
CBWD3-206ENST00000478048 PDE6HQ13956 83 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 PSG3Q16557 428 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 ACTL10Q5JWF8 245 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 IQCF2Q8IXL9 164 aa8.46□□□□□ -1.06
CBWD3-206ENST00000478048 PRAC2D3DTV9 90 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 FRMD6-AS1P0C7T7 363 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 ZNF705DP0CH99 300 aaPredicted RBP8.45□□□□□ -1.06
CBWD3-206ENST00000478048 ZNF705BP0CI00 300 aaPredicted RBP8.45□□□□□ -1.06
CBWD3-206ENST00000478048 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 ZNF738Q8NE65 137 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 SUN5Q8TC36 379 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 SFT2D1Q8WV19 159 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 MBD3L1Q8WWY6 194 aa8.45□□□□□ -1.06
CBWD3-206ENST00000478048 A8MZ25 164 aa8.44□□□□□ -1.06
CBWD3-206ENST00000478048 RPL35AP18077 110 aaKnown RBP8.44□□□□□ -1.06
CBWD3-206ENST00000478048 RAB5CP51148 216 aa8.44□□□□□ -1.06
CBWD3-206ENST00000478048 PSG9Q00887 426 aa8.44□□□□□ -1.06
CBWD3-206ENST00000478048 ICAM4Q14773 271 aa8.44□□□□□ -1.06
CBWD3-206ENST00000478048 LCE4AQ5TA78 99 aa8.44□□□□□ -1.06
CBWD3-206ENST00000478048 Q9H3A6 140 aa8.44□□□□□ -1.06
CBWD3-206ENST00000478048 SAV1Q9H4B6 383 aaPredicted RBP8.44□□□□□ -1.06
CBWD3-206ENST00000478048 LINC00322Q6ZN03 302 aaPredicted RBP8.43□□□□□ -1.06
CBWD3-206ENST00000478048 RPUSD4Q96CM3 377 aaKnown RBP8.43□□□□□ -1.06
CBWD3-206ENST00000478048 TMEM167BQ9NRX6 74 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 A0A0J9YX75 114 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 PGPA6NDG6 321 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
CBWD3-206ENST00000478048 H3BMM0 161 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 IGKV3-20P01619 116 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 FOXI2Q6ZQN5 318 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 STHQ8IWL8 128 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 AAMDCQ9H7C9 122 aa8.43□□□□□ -1.06
CBWD3-206ENST00000478048 LOC102724200A0A096LPH7 203 aaPredicted RBP8.42□□□□□ -1.06
CBWD3-206ENST00000478048 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 UBE2G2P60604 165 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 CCL20P78556 96 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 EBLN2Q6P2I7 272 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 TEX261Q6UWH6 196 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 NBEAL2Q6ZNJ1 2754 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
CBWD3-206ENST00000478048 LYPD1Q8N2G4 141 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 ASCL2Q99929 193 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 CLEC5AQ9NY25 188 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 YTHDF2Q9Y5A9 579 aaKnown RBP8.42□□□□□ -1.06
CBWD3-206ENST00000478048 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
CBWD3-206ENST00000478048 GGTLC3B5MD39 225 aa8.41□□□□□ -1.06
CBWD3-206ENST00000478048 CNN1P51911 297 aaKnown RBP8.41□□□□□ -1.06
CBWD3-206ENST00000478048 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
CBWD3-206ENST00000478048 SBSPONQ8IVN8 264 aa8.41□□□□□ -1.06
CBWD3-206ENST00000478048 OR4B1Q8NGF8 309 aa8.41□□□□□ -1.06
CBWD3-206ENST00000478048 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
CBWD3-206ENST00000478048 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
CBWD3-206ENST00000478048 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
CBWD3-206ENST00000478048 SUMO1P63165 101 aaKnown RBP8.4□□□□□ -1.06
CBWD3-206ENST00000478048 GNG5P63218 68 aa8.4□□□□□ -1.06
CBWD3-206ENST00000478048 HAGHQ16775 308 aa8.4□□□□□ -1.06
CBWD3-206ENST00000478048 ZNF680Q8NEM1 530 aa8.4□□□□□ -1.06
CBWD3-206ENST00000478048 DNAH9Q9NYC9 4486 aa8.4□□□□□ -1.06
CBWD3-206ENST00000478048 IGKV2-40A0A087WW87 121 aaPredicted RBP8.4□□□□□ -1.07
CBWD3-206ENST00000478048 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.07
CBWD3-206ENST00000478048 A0A1W2PRE2 83 aa8.4□□□□□ -1.07
CBWD3-206ENST00000478048 FAM74A7A6NL05 159 aa8.4□□□□□ -1.07
CBWD3-206ENST00000478048 IGKV2D-40P01614 121 aaPredicted RBP8.4□□□□□ -1.07
CBWD3-206ENST00000478048 FXYD7P58549 80 aa8.4□□□□□ -1.07
CBWD3-206ENST00000478048 ERCC8Q13216 396 aa8.4□□□□□ -1.07
CBWD3-206ENST00000478048 PCNPQ8WW12 178 aaKnown RBP8.4□□□□□ -1.07
CBWD3-206ENST00000478048 RPH3ALQ9UNE2 315 aa8.4□□□□□ -1.07
CBWD3-206ENST00000478048 A8MTW9 85 aa8.39□□□□□ -1.07
CBWD3-206ENST00000478048 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
CBWD3-206ENST00000478048 PAGE4O60829 102 aa8.39□□□□□ -1.07
CBWD3-206ENST00000478048 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
CBWD3-206ENST00000478048 AMTNQ6UX39 209 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms