RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TMEM50AO95807 157 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 MT-CO2P00403 227 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 HPRT1P00492 218 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 NQO2P16083 231 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 RORCP51449 518 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 TAS2R60P59551 318 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 SLAQ13239 276 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 MRPL23Q16540 153 aaKnown RBP2.68□□□□□ -1.98
VPS50-214ENST00000477935 TRIM16LQ309B1 348 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 GDF5OSQ5U4N7 250 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 FAM78BQ5VT40 261 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 SFXN4Q6P4A7 337 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 MARCH1Q8TCQ1 289 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 TCTEX1D2Q8WW35 142 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 TMEM230Q96A57 120 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 LINC00052Q96N35 136 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 CMSS1Q9BQ75 279 aaKnown RBP2.68□□□□□ -1.98
VPS50-214ENST00000477935 TMEM59Q9BXS4 323 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 TMBIM4Q9HC24 238 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 NOP10Q9NPE3 64 aaKnown RBP2.68□□□□□ -1.98
VPS50-214ENST00000477935 CYTL1Q9NRR1 136 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 FKBP11Q9NYL4 201 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 RBMX2Q9Y388 322 aaKnown RBP2.68□□□□□ -1.98
VPS50-214ENST00000477935 ICOSQ9Y6W8 199 aa2.68□□□□□ -1.98
VPS50-214ENST00000477935 TRAV30A0A087WSZ9 112 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 RBFOX3A6NFN3 312 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 GSTZ1O43708 216 aaPredicted RBP2.67□□□□□ -1.98
VPS50-214ENST00000477935 SNAPINO95295 136 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 LALBAP00709 142 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 HLA-DQB1P01920 261 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 RLN2P04090 185 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 CTXN2P0C2S0 81 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 CD37P11049 281 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 RANBP1P43487 201 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 PSMB3P49720 205 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 RPL30P62888 115 aaKnown RBP2.67□□□□□ -1.98
VPS50-214ENST00000477935 PRCDQ00LT1 54 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 ST3GAL4Q11206 333 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 Q499Y3 187 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 NEGR1Q7Z3B1 354 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 LHFPL3Q86UP9 236 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 DHFR2Q86XF0 187 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 H1FOOQ8IZA3 346 aaPredicted RBP2.67□□□□□ -1.98
VPS50-214ENST00000477935 Q8N976 141 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 OR52E5Q8NH55 327 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 COQ8AQ8NI60 647 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 TMEM263Q8WUH6 116 aaKnown RBP2.67□□□□□ -1.98
VPS50-214ENST00000477935 TMEM203Q969S6 136 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 LINC01587Q99440 93 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 SLC29A1Q99808 456 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 TPPP3Q9BW30 176 aa2.67□□□□□ -1.98
VPS50-214ENST00000477935 RCL1Q9Y2P8 373 aaKnown RBP2.67□□□□□ -1.98
VPS50-214ENST00000477935 AK6Q9Y3D8 172 aaKnown RBP2.67□□□□□ -1.98
VPS50-214ENST00000477935 A0A0J9YX75 114 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 A8MTW9 85 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 TMEM14DPA8MWL7 114 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 M0R129 80 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 ISLRO14498 428 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 SOCS1O15524 211 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 ZNF324O75467 553 aaPredicted RBP2.66□□□□□ -1.98
VPS50-214ENST00000477935 SNAPC5O75971 98 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 PRM2P04554 102 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 CD3GP09693 182 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 NUP62P37198 522 aaPredicted RBP2.66□□□□□ -1.98
VPS50-214ENST00000477935 DAPP51397 102 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 MSMO1Q15800 293 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 HS3ST5Q8IZT8 346 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 Q8WTZ3 238 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 HDHD3Q9BSH5 251 aaPredicted RBP2.66□□□□□ -1.98
VPS50-214ENST00000477935 RPRMQ9NS64 109 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 DOK5Q9P104 306 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 OR51B2Q9Y5P1 312 aa2.66□□□□□ -1.98
VPS50-214ENST00000477935 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.65□□□□□ -1.99
VPS50-214ENST00000477935 TRAV8-7A0A075B6U6 113 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 H7BYZ3 331 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 CORTO00230 105 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 CRXO43186 299 aaPredicted RBP2.65□□□□□ -1.99
VPS50-214ENST00000477935 HTN1P15515 57 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 HSPA13P48723 471 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 GTF2A1P52655 376 aaPredicted RBP2.65□□□□□ -1.99
VPS50-214ENST00000477935 ARPC4P59998 168 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 ERHP84090 104 aaKnown RBP2.65□□□□□ -1.99
VPS50-214ENST00000477935 EIF4EBP1Q13541 118 aaPredicted RBP2.65□□□□□ -1.99
VPS50-214ENST00000477935 RAB11BQ15907 218 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 KDM4DQ6B0I6 523 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 AMTNQ6UX39 209 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 Q6ZS49 121 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 MS4A15Q8N5U1 240 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 PGLYRP3Q96LB9 341 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 TSC22D3Q99576 134 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 TAS2R8Q9NYW2 309 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 PRO0255Q9UI72 69 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 PRNDQ9UKY0 176 aa2.65□□□□□ -1.99
VPS50-214ENST00000477935 TRGV2A0A075B6R0 118 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 IGKV2D-24A0A075B6R9 120 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
VPS50-214ENST00000477935 SUB1P53999 127 aaKnown RBP eCLIP2.64□□□□□ -1.99
VPS50-214ENST00000477935 QRFPP83859 136 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 CATR1Q13166 79 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 SPINK13Q1W4C9 94 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms