RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 NDUFA13Q9P0J0 144 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 GSKIPQ9P0R6 139 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 RCL1Q9Y2P8 373 aaKnown RBP8.14□□□□□ -1.11
CPSF7-211ENST00000477890 LRP1BQ9NZR2 4599 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 TRAV12-3A0A0B4J271 114 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 TAS2R30P59541 319 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 OPCMLQ14982 345 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 SPANXN2Q5MJ10 180 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 C10orf113Q5VZT2 155 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 ZBTB8BQ8NAP8 495 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-211ENST00000477890 TMEM37Q8WXS4 190 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 MGST2Q99735 147 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 SRRQ9GZT4 340 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 TMPRSS5Q9H3S3 457 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 SCRT2Q9NQ03 307 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 ZNF586Q9NXT0 402 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 MRPS16Q9Y3D3 137 aaKnown RBP8.13□□□□□ -1.11
CPSF7-211ENST00000477890 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
CPSF7-211ENST00000477890 LINC00854A0A1B0GVQ3 168 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 A0A1W2PPQ1 181 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 C7orf66A4D0T2 115 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 H3BNG1 76 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 H3BQ15 152 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 LEPP41159 167 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 BAK1Q16611 211 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 TRIQKQ629K1 86 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 GGACTQ9BVM4 153 aa8.12□□□□□ -1.11
CPSF7-211ENST00000477890 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-211ENST00000477890 BTF3P20290 206 aaKnown RBP8.11□□□□□ -1.11
CPSF7-211ENST00000477890 CAMLGP49069 296 aa8.11□□□□□ -1.11
CPSF7-211ENST00000477890 Q6ZRG5 221 aa8.11□□□□□ -1.11
CPSF7-211ENST00000477890 Q6ZTI0 123 aa8.11□□□□□ -1.11
CPSF7-211ENST00000477890 ZNF431Q8TF32 576 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-211ENST00000477890 SAT2Q96F10 170 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-211ENST00000477890 ODF3Q96PU9 254 aa8.11□□□□□ -1.11
CPSF7-211ENST00000477890 PYGO2Q9BRQ0 406 aa8.11□□□□□ -1.11
CPSF7-211ENST00000477890 DNAJC4Q9NNZ3 241 aa8.11□□□□□ -1.11
CPSF7-211ENST00000477890 TRGV2A0A075B6R0 118 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 TRAV5A0A0B4J249 113 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 NPIPB6E9PJ23 425 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 L7N2F9 121 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 BCAP31P51572 246 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 VAMP2P63027 116 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
CPSF7-211ENST00000477890 RAB31Q13636 194 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 GUK1Q16774 197 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 CNPY1Q3B7I2 92 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 MIC13Q5XKP0 118 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 NRARPQ7Z6K4 114 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 MITD1Q8WV92 249 aa8.1□□□□□ -1.11
CPSF7-211ENST00000477890 A0A096LPF7 62 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 CENPXA8MT69 81 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 CCSO14618 274 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 BTCP35070 178 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 LINC00315P59091 139 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 OR1L4Q8NGR5 311 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 VSIG2Q96IQ7 327 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 GSN-AS1Q9NRJ2 163 aa8.09□□□□□ -1.11
CPSF7-211ENST00000477890 LSM5Q9Y4Y9 91 aaKnown RBP8.09□□□□□ -1.11
CPSF7-211ENST00000477890 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 C7orf71A4D174 169 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 FAM25EA8MYX2 175 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 M0R3E3 92 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 CST7O76096 145 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
CPSF7-211ENST00000477890 CAV2P51636 162 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 ERCC8Q13216 396 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 ZNF846Q147U1 533 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 ZNF680Q8NEM1 530 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 PFDN5Q99471 154 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 FUT9Q9Y231 359 aa8.08□□□□□ -1.12
CPSF7-211ENST00000477890 APOBP04114 4563 aaKnown RBP8.07□□□□□ -1.12
CPSF7-211ENST00000477890 FAM24AA6NFZ4 105 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 SIVA1O15304 175 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 ZNF253O75346 499 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 BTN1A1Q13410 526 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 C11orf72Q8NBR9 251 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 MRPL53Q96EL3 112 aaKnown RBP8.07□□□□□ -1.12
CPSF7-211ENST00000477890 C18orf15Q96N68 181 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 SDHCQ99643 169 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-211ENST00000477890 SLC39A9Q9NUM3 307 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 UQCC1Q9NVA1 299 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 PTTG2Q9NZH5 202 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 WDR83OSQ9Y284 106 aa8.07□□□□□ -1.12
CPSF7-211ENST00000477890 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
CPSF7-211ENST00000477890 TRBV19A0A075B6N1 114 aa8.06□□□□□ -1.12
CPSF7-211ENST00000477890 UBE2L5PA0A1B0GUS4 154 aa8.06□□□□□ -1.12
CPSF7-211ENST00000477890 KLLNB2CW77 178 aa8.06□□□□□ -1.12
CPSF7-211ENST00000477890 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-211ENST00000477890 RNASE4P34096 147 aaKnown RBP8.06□□□□□ -1.12
CPSF7-211ENST00000477890 BAXQ07812 192 aa8.06□□□□□ -1.12
CPSF7-211ENST00000477890 CD300CQ08708 224 aa8.06□□□□□ -1.12
CPSF7-211ENST00000477890 Q6ZRN7 208 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-211ENST00000477890 C12orf45Q8N5I9 185 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-211ENST00000477890 EIF4E3Q8N5X7 224 aaKnown RBP8.06□□□□□ -1.12
CPSF7-211ENST00000477890 C20orf85Q9H1P6 137 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms