RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HBE1P02100 147 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
SEC13-215ENST00000477547 HLA-DRB4P13762 266 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 UBE2G2P60604 165 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 TEX261Q6UWH6 196 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 STHQ8IWL8 128 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 SAV1Q9H4B6 383 aaPredicted RBP11.33□□□□□ -0.6
SEC13-215ENST00000477547 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 HLA-DRB4X5D2U9 266 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
SEC13-215ENST00000477547 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
SEC13-215ENST00000477547 ZNF705FA8MVS1 300 aaPredicted RBP11.32□□□□□ -0.6
SEC13-215ENST00000477547 TEX46H3BTG2 121 aa11.32□□□□□ -0.6
SEC13-215ENST00000477547 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
SEC13-215ENST00000477547 RPL35AP18077 110 aaKnown RBP11.32□□□□□ -0.6
SEC13-215ENST00000477547 DEFB121Q5J5C9 76 aa11.32□□□□□ -0.6
SEC13-215ENST00000477547 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
SEC13-215ENST00000477547 TRAV1-1A0A0B4J248 108 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 A0A0J9YX75 114 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 A8MZ25 164 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 GGTLC3B5MD39 225 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 IFNA7P01567 189 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
SEC13-215ENST00000477547 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
SEC13-215ENST00000477547 ZNF680Q8NEM1 530 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
SEC13-215ENST00000477547 TENM3Q9P273 2699 aa11.3□□□□□ -0.6
SEC13-215ENST00000477547 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
SEC13-215ENST00000477547 H3BMM0 161 aa11.3□□□□□ -0.6
SEC13-215ENST00000477547 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 CSN1S1P47710 185 aa11.3□□□□□ -0.6
SEC13-215ENST00000477547 BLOC1S1P78537 153 aa11.3□□□□□ -0.6
SEC13-215ENST00000477547 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
SEC13-215ENST00000477547 YTHDF2Q9Y5A9 579 aaKnown RBP11.3□□□□□ -0.6
SEC13-215ENST00000477547 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
SEC13-215ENST00000477547 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 PGPA6NDG6 321 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 FAM74A7A6NL05 159 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
SEC13-215ENST00000477547 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
SEC13-215ENST00000477547 PPT1P50897 306 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
SEC13-215ENST00000477547 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 ARL2-SNX15V9GYD0 113 aa11.29□□□□□ -0.6
SEC13-215ENST00000477547 DUSP14O95147 198 aaKnown RBP11.28□□□□□ -0.6
SEC13-215ENST00000477547 APOC4P55056 127 aa11.28□□□□□ -0.6
SEC13-215ENST00000477547 GNG5P63218 68 aa11.28□□□□□ -0.6
SEC13-215ENST00000477547 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
SEC13-215ENST00000477547 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
SEC13-215ENST00000477547 RYR2Q92736 4967 aa11.28□□□□□ -0.6
SEC13-215ENST00000477547 PAGE4O60829 102 aa11.27□□□□□ -0.61
SEC13-215ENST00000477547 IFNA1P01562 189 aa11.27□□□□□ -0.61
SEC13-215ENST00000477547 ATP5G3P48201 142 aa11.27□□□□□ -0.61
SEC13-215ENST00000477547 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
SEC13-215ENST00000477547 CCL20P78556 96 aa11.27□□□□□ -0.61
SEC13-215ENST00000477547 CST9LP1Q5W188 147 aa11.27□□□□□ -0.61
SEC13-215ENST00000477547 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
SEC13-215ENST00000477547 A8MTW9 85 aa11.26□□□□□ -0.61
SEC13-215ENST00000477547 DIRC3C9JPN6 131 aa11.26□□□□□ -0.61
SEC13-215ENST00000477547 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
SEC13-215ENST00000477547 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
SEC13-215ENST00000477547 PCNPQ8WW12 178 aaKnown RBP11.26□□□□□ -0.61
SEC13-215ENST00000477547 NKX6-2Q9C056 277 aaPredicted RBP11.26□□□□□ -0.61
SEC13-215ENST00000477547 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 CA1P00915 261 aaPredicted RBP11.25□□□□□ -0.61
SEC13-215ENST00000477547 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
SEC13-215ENST00000477547 MORN3Q6PF18 240 aaPredicted RBP11.25□□□□□ -0.61
SEC13-215ENST00000477547 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
SEC13-215ENST00000477547 RBAKDNA6NC62 111 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 TCRAP04437 139 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 BCL2P10415 239 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 ERCC8Q13216 396 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 HAGHQ16775 308 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 VGLL1Q99990 258 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 B9D2Q9BPU9 175 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
SEC13-215ENST00000477547 SERTM2A0A1B0GWG4 89 aa11.23□□□□□ -0.61
SEC13-215ENST00000477547 C11orf94C9JXX5 98 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms