RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 D6R8Y8 96 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 H0Y8G0 127 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 SCGB2A1O75556 95 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 HLA-DRB4P13762 266 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 IFI27P40305 119 aaPredicted RBP10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 PAX8Q06710 450 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 CCL17Q92583 94 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 RNASE6Q93091 150 aaKnown RBP10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 HIGD1BQ9P298 99 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 HLA-DRB4X5D2U9 266 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 K7EIM0 57 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 NCR2O95944 276 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 BMI1P35226 326 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 CRIP1P50238 77 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 SRSF6Q13247 344 aaKnown RBP10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 FER1L6-AS1Q8NA97 138 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 OR8A1Q8NGG7 326 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 IGFBPL1Q8WX77 278 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
HLA-DMA-208ENST00000477541 ATMQ13315 3056 aa10.66□□□□□ -0.7
HLA-DMA-208ENST00000477541 BSPH1Q075Z2 132 aa10.66□□□□□ -0.7
HLA-DMA-208ENST00000477541 LYZL1Q6UWQ5 148 aa10.66□□□□□ -0.7
HLA-DMA-208ENST00000477541 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
HLA-DMA-208ENST00000477541 WFDC8Q8IUA0 241 aa10.66□□□□□ -0.7
HLA-DMA-208ENST00000477541 RPEQ96AT9 228 aa10.66□□□□□ -0.7
HLA-DMA-208ENST00000477541 IGHV3-72A0A0B4J1Y9 119 aa10.65□□□□□ -0.7
HLA-DMA-208ENST00000477541 MRPL51Q4U2R6 128 aaKnown RBP10.65□□□□□ -0.7
HLA-DMA-208ENST00000477541 C22orf34Q6ZV56 151 aa10.65□□□□□ -0.7
HLA-DMA-208ENST00000477541 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
HLA-DMA-208ENST00000477541 JKAMPQ9P055 326 aa10.65□□□□□ -0.7
HLA-DMA-208ENST00000477541 SMPXQ9UHP9 88 aa10.65□□□□□ -0.7
HLA-DMA-208ENST00000477541 MGAQ8IWI9 3026 aa10.65□□□□□ -0.71
HLA-DMA-208ENST00000477541 IGHV3-21A0A0B4J1V1 117 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 A0A0G2JLM5 398 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 CNTFRP26992 372 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 CACNG7P62955 275 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 KIR3DS1Q14943 382 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 FBXL15Q9H469 300 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 DYNLRB1Q9NP97 96 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 UBR5O95071 2799 aaPredicted RBP10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 G3V4G9 280 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 LY6LH3BQJ8 138 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 SH2D1AO60880 128 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 IL4P05112 153 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 RPL7P18124 248 aaKnown RBP10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 ERASQ7Z444 233 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 LHFPL4Q7Z7J7 247 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 MCRIP2Q9BUT9 160 aaKnown RBP10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 NXT2Q9NPJ8 142 aaKnown RBP10.64□□□□□ -0.71
HLA-DMA-208ENST00000477541 NPIPB5A8MRT5 1133 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 CKS2P33552 79 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 PRR31Q5SQ13 230 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 NPBQ8NG41 125 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 MEGF9Q9H1U4 602 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 MAP1LC3AQ9H492 121 aa10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 TIMM8BQ9Y5J9 83 aaPredicted RBP10.63□□□□□ -0.71
HLA-DMA-208ENST00000477541 MALRD1Q5VYJ5 2156 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 A0A1W2PPM0 123 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 PRRG2O14669 202 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 NDUFA3O95167 84 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 CNIH1O95406 144 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 MFAP4P55083 255 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 THYN1Q9P016 225 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 MYO9AB2RTY4 2548 aa10.62□□□□□ -0.71
HLA-DMA-208ENST00000477541 B9A039 149 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 NBR2O15453 112 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 GNG7O60262 68 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 NDUFS7O75251 213 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 FABP2P12104 132 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 FCGR2BP31994 310 aaPredicted RBP10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 C17orf77Q96MU5 243 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 PRR25Q96S07 402 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 PLXNB1O43157 2135 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 A0A0G2JNJ9 132 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 H3BUT2 72 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 ATP5LO75964 103 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 SMIM13P0DJ93 91 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 FCER1GP30273 86 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 ABHD17AQ96GS6 310 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 Q9UFV3 132 aa10.61□□□□□ -0.71
HLA-DMA-208ENST00000477541 LOC389332A0A1B0GUA5 103 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 FAM106CPP0CH98 169 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 APELAP0DMC3 54 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 EVI2AP22794 236 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 UQCRFS1P47985 274 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 RAB9AP51151 201 aa10.6□□□□□ -0.71
HLA-DMA-208ENST00000477541 FAM106AQ4KMX7 169 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms