RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 IGSF23A1L1A6 192 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 INMT-MINDY4F8WBC2 141 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 H3BTX0 84 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 M0R2N4 97 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 MPDU1O75352 247 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 IGLC2P0DOY2 106 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 FGF7P21781 194 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 MORN5Q5VZ52 161 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 C20orf144Q9BQM9 153 aa11.14□□□□□ -0.63
CLDN11-204ENST00000477531 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
CLDN11-204ENST00000477531 TRAV5A0A0B4J249 113 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 H7BYZ3 331 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 SLC17A3O00476 420 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 PRB4P10163 310 aaPredicted RBP11.13□□□□□ -0.63
CLDN11-204ENST00000477531 AZU1P20160 251 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 IL15RAQ13261 267 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 RNF212Q495C1 297 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 CCDC28AQ8IWP9 274 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 SLC25A31Q9H0C2 315 aa11.13□□□□□ -0.63
CLDN11-204ENST00000477531 H3BQ15 152 aa11.12□□□□□ -0.63
CLDN11-204ENST00000477531 ATP5G1P05496 136 aa11.12□□□□□ -0.63
CLDN11-204ENST00000477531 ATP5G3P48201 142 aa11.12□□□□□ -0.63
CLDN11-204ENST00000477531 LGALS9BQ3B8N2 356 aa11.12□□□□□ -0.63
CLDN11-204ENST00000477531 CHAC2Q8WUX2 184 aa11.12□□□□□ -0.63
CLDN11-204ENST00000477531 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
CLDN11-204ENST00000477531 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
CLDN11-204ENST00000477531 CBY3A6NI87 242 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 PRAC2D3DTV9 90 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 E5RGE8 158 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 F5H768 121 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 ZNF253O75346 499 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 LEPP41159 167 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 CYCSP99999 105 aaKnown RBP11.11□□□□□ -0.63
CLDN11-204ENST00000477531 FCN2Q15485 313 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 TMEM263Q8WUH6 116 aaKnown RBP11.11□□□□□ -0.63
CLDN11-204ENST00000477531 TIMM9Q9Y5J7 89 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 HECTD4Q9Y4D8 3996 aa11.11□□□□□ -0.63
CLDN11-204ENST00000477531 DNAH2Q9P225 4427 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 ODF3Q96PU9 254 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 NMES1Q9C002 83 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
CLDN11-204ENST00000477531 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 PRELID1Q9Y255 219 aa11.1□□□□□ -0.63
CLDN11-204ENST00000477531 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 J3KRW8 73 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 SIX6O95475 246 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 HIST1H1EP10412 219 aaKnown RBP11.09□□□□□ -0.63
CLDN11-204ENST00000477531 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
CLDN11-204ENST00000477531 LRRC37A5PQ49AS3 106 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 SOHLH1Q5JUK2 328 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 OR5C1Q8NGR4 320 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
CLDN11-204ENST00000477531 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 PARD6GQ9BYG4 376 aaPredicted RBP11.09□□□□□ -0.63
CLDN11-204ENST00000477531 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
CLDN11-204ENST00000477531 TRBV19A0A075B6N1 114 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 NUDT3O95989 172 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 CT45A10P0DMU9 189 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 NHLH2Q02577 135 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 PDE6HQ13956 83 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 RNASE8Q8TDE3 154 aaKnown RBP11.08□□□□□ -0.64
CLDN11-204ENST00000477531 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 AAMDCQ9H7C9 122 aa11.08□□□□□ -0.64
CLDN11-204ENST00000477531 PRSS29PA6NIE9 313 aa11.07□□□□□ -0.64
CLDN11-204ENST00000477531 NPIPB6E9PJ23 425 aa11.07□□□□□ -0.64
CLDN11-204ENST00000477531 CLINT1Q14677 625 aa11.07□□□□□ -0.64
CLDN11-204ENST00000477531 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
CLDN11-204ENST00000477531 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
CLDN11-204ENST00000477531 DNAH17Q9UFH2 4485 aa11.07□□□□□ -0.64
CLDN11-204ENST00000477531 FAT2Q9NYQ8 4349 aa11.06□□□□□ -0.64
CLDN11-204ENST00000477531 TRAV12-3A0A0B4J271 114 aa11.06□□□□□ -0.64
CLDN11-204ENST00000477531 C17orf112F2Z3M2 114 aa11.06□□□□□ -0.64
CLDN11-204ENST00000477531 SLC25A5P05141 298 aaKnown RBP11.06□□□□□ -0.64
CLDN11-204ENST00000477531 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
CLDN11-204ENST00000477531 PYGO2Q9BRQ0 406 aa11.06□□□□□ -0.64
CLDN11-204ENST00000477531 OR5AC2Q9NZP5 309 aa11.06□□□□□ -0.64
CLDN11-204ENST00000477531 M0R3E3 92 aa11.05□□□□□ -0.64
CLDN11-204ENST00000477531 SSNA1O43805 119 aa11.05□□□□□ -0.64
CLDN11-204ENST00000477531 PYYP10082 97 aa11.05□□□□□ -0.64
CLDN11-204ENST00000477531 CCL18P55774 89 aa11.05□□□□□ -0.64
CLDN11-204ENST00000477531 GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
CLDN11-204ENST00000477531 ALG5Q9Y673 324 aa11.05□□□□□ -0.64
CLDN11-204ENST00000477531 RTL8CO15255 209 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 PET100P0DJ07 73 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 ERCC8Q13216 396 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 OR5I1Q13606 314 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 Q6ZR54 194 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 PPP1R1CQ8WVI7 109 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 MRPL32Q9BYC8 188 aaKnown RBP11.04□□□□□ -0.64
CLDN11-204ENST00000477531 OR51M1Q9H341 326 aa11.04□□□□□ -0.64
CLDN11-204ENST00000477531 C7orf71A4D174 169 aa11.03□□□□□ -0.64
CLDN11-204ENST00000477531 NDUFB4O95168 129 aa11.03□□□□□ -0.64
CLDN11-204ENST00000477531 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
CLDN11-204ENST00000477531 ICAM4Q14773 271 aa11.03□□□□□ -0.64
CLDN11-204ENST00000477531 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms