RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLC38A11Q08AI6 406 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 TMEM128Q5BJH2 165 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 LINC00305Q7Z4B0 112 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 BPIFA4PQ86YQ2 179 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 LINC00612Q8N6U2 182 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 ZBTB8BQ8NAP8 495 aaPredicted RBP4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 MCFD2Q8NI22 146 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 VSIG2Q96IQ7 327 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 ZNF331Q9NQX6 463 aaPredicted RBP4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 GSN-AS1Q9NRJ2 163 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 CCDC59Q9P031 241 aaKnown RBP4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 RNF24Q9Y225 148 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
RTFDC1-206ENST00000477485 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 NPIPB6E9PJ23 425 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 CTDSPLO15194 276 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 CCNKO75909 580 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 METTL15P1P0C7V9 234 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 SLC25A6P12236 298 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 CXCL2P19875 107 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 POLR2GP62487 172 aaKnown RBP eCLIP4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 PPP1R1AQ13522 171 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 TEPPQ6URK8 271 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 ZNF680Q8NEM1 530 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 PYGO2Q9BRQ0 406 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 MRPL16Q9NX20 251 aaKnown RBP4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 RABL2AQ9UBK7 228 aaPredicted RBP4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 RSL24D1Q9UHA3 163 aaKnown RBP4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 PXMP4Q9Y6I8 212 aa4.56□□□□□ -1.68
RTFDC1-206ENST00000477485 TRGV4A0A0C4DH28 118 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 LINC00854A0A1B0GVQ3 168 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 C7orf71A4D174 169 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 E5RGE8 158 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 RGS13O14921 159 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 AGPAT2O15120 278 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 SFT2D2O95562 160 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 CT45A10P0DMU9 189 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 EVI2AP22794 236 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 RNASE4P34096 147 aaKnown RBP4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 ZNF415Q09FC8 603 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 DAZ2Q13117 558 aaKnown RBP4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 ERCC8Q13216 396 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 SPCS2Q15005 226 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 C10orf113Q5VZT2 155 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 PATE2Q6UY27 113 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 ZNF546Q86UE3 836 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 TOMM5Q8N4H5 51 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 OR10P1Q8NGE3 313 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 PCNPQ8WW12 178 aaKnown RBP4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 C8orf49Q96NF6 230 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 ARPC5LQ9BPX5 153 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 NPVFQ9HCQ7 196 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 MSRB1Q9NZV6 116 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 KLF12Q9Y4X4 402 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
RTFDC1-206ENST00000477485 HERC1Q15751 4861 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 FABP12A6NFH5 140 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 MRPS12O15235 138 aaKnown RBP4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 PRAF2O60831 178 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 ZNF324O75467 553 aaPredicted RBP4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 GPX1P07203 203 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 SRIP30626 198 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 AP3S2P59780 193 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 PLP1P60201 277 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 OPCMLQ14982 345 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 MRPL23Q16540 153 aaKnown RBP4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 PYDC2Q56P42 97 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 PXDC1Q5TGL8 231 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 LYPD5Q6UWN5 251 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 WFDC10BQ8IUB3 73 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 EIF4E3Q8N5X7 224 aaKnown RBP4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 LRTM2Q8N967 370 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 ZNF431Q8TF32 576 aaPredicted RBP4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 LINC00467Q9BRT7 94 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 PRO0255Q9UI72 69 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 HHLA3Q9XRX5 114 aa4.54□□□□□ -1.68
RTFDC1-206ENST00000477485 TRAV5A0A0B4J249 113 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 H3BQ15 152 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 SPINK4O60575 86 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 NOL3O60936 208 aaKnown RBP4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 MPDU1O75352 247 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 CRYGDP07320 174 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 CRYBA4P53673 196 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 CD300CQ08708 224 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 Q6ZRG5 221 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 C11orf72Q8NBR9 251 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 RAB2BQ8WUD1 216 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 ST6GAL2Q96JF0 529 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 ODF3Q96PU9 254 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 SOSTQ9BQB4 213 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 SLC25A21Q9BQT8 299 aaPredicted RBP4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 Q9HAA7 133 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 GSKIPQ9P0R6 139 aa4.53□□□□□ -1.68
RTFDC1-206ENST00000477485 TP53TG3Q9ULZ0 132 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms