RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
SMIM4-202ENST00000476842 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
SMIM4-202ENST00000476842 PQLC2Q6ZP29 291 aa12.95□□□□□ -0.34
SMIM4-202ENST00000476842 ZNF705EA8MWA4 302 aaPredicted RBP12.94□□□□□ -0.34
SMIM4-202ENST00000476842 EIF3GO75821 320 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMIM4-202ENST00000476842 CDC34P49427 236 aaPredicted RBP12.94□□□□□ -0.34
SMIM4-202ENST00000476842 FXYD7P58549 80 aa12.94□□□□□ -0.34
SMIM4-202ENST00000476842 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
SMIM4-202ENST00000476842 RAB24Q969Q5 203 aa12.94□□□□□ -0.34
SMIM4-202ENST00000476842 AAMDCQ9H7C9 122 aa12.94□□□□□ -0.34
SMIM4-202ENST00000476842 KANTRA0A1W2PQU2 76 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 M0R3E3 92 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 AMBPP02760 352 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 STAG3L2P0CL84 134 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 STAG3L3P0CL85 134 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-202ENST00000476842 UBE2L3P68036 154 aaKnown RBP12.93□□□□□ -0.34
SMIM4-202ENST00000476842 ICAM4Q14773 271 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 TMUB2Q71RG4 321 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 EXOC3-AS1Q8N2X6 119 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
SMIM4-202ENST00000476842 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-202ENST00000476842 A0A0J9YWU9 116 aa12.92□□□□□ -0.34
SMIM4-202ENST00000476842 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
SMIM4-202ENST00000476842 BCL2L11O43521 198 aa12.92□□□□□ -0.34
SMIM4-202ENST00000476842 C1QBP02746 253 aa12.92□□□□□ -0.34
SMIM4-202ENST00000476842 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
SMIM4-202ENST00000476842 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
SMIM4-202ENST00000476842 DNAH7Q8WXX0 4024 aa12.91□□□□□ -0.34
SMIM4-202ENST00000476842 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
SMIM4-202ENST00000476842 MUC7Q8TAX7 377 aa12.91□□□□□ -0.34
SMIM4-202ENST00000476842 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
SMIM4-202ENST00000476842 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
SMIM4-202ENST00000476842 X6R8D5 127 aa12.91□□□□□ -0.34
SMIM4-202ENST00000476842 A0A1B0GVG6 124 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 NPIPB6E9PJ23 425 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 BOLA2-SMG1P6H3BVE0 249 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 MIFP14174 115 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 SPINK13Q1W4C9 94 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 LGALSLQ3ZCW2 172 aaPredicted RBP12.9□□□□□ -0.34
SMIM4-202ENST00000476842 AKR1C8PQ5T2L2 129 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 SUN5Q8TC36 379 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 IGF2BP2-AS1Q96M15 143 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 Q9H3A6 140 aa12.9□□□□□ -0.34
SMIM4-202ENST00000476842 C3orf84H3BNL1 204 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 M0R2Z0 102 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
SMIM4-202ENST00000476842 PFDN1O60925 122 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 SEC11BP0C7V7 166 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 ARL14EPLP0DKL9 152 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 EIF5AP63241 154 aaKnown RBP12.89□□□□□ -0.35
SMIM4-202ENST00000476842 C1orf158Q8N1D5 194 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 Q8NAQ8 132 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 NEU1Q99519 415 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
SMIM4-202ENST00000476842 GOLT1BQ9Y3E0 138 aa12.89□□□□□ -0.35
SMIM4-202ENST00000476842 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 CXorf1O96002 111 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 CT45A10P0DMU9 189 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 GCHFRP30047 84 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 ZNF726P1Q15940 193 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
SMIM4-202ENST00000476842 IGHV4-28A0A0C4DH34 117 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 PGPA6NDG6 321 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 TSPOP30536 169 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 CDKN1BP46527 198 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 CSN1S1P47710 185 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 ERCC8Q13216 396 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 C9orf47Q6ZRZ4 202 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 BAP18Q8IXM2 172 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 RXFP4Q8TDU9 374 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 TMEM167BQ9NRX6 74 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
SMIM4-202ENST00000476842 IGHV3OR16-12A0A075B7B8 117 aa12.86□□□□□ -0.35
SMIM4-202ENST00000476842 INSP01308 110 aa12.86□□□□□ -0.35
SMIM4-202ENST00000476842 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
SMIM4-202ENST00000476842 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
SMIM4-202ENST00000476842 RBMY1FQ15415 496 aaKnown RBP12.86□□□□□ -0.35
SMIM4-202ENST00000476842 FAM74A1Q5RGS3 127 aa12.86□□□□□ -0.35
SMIM4-202ENST00000476842 ARL6IP6Q8N6S5 226 aa12.86□□□□□ -0.35
SMIM4-202ENST00000476842 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
SMIM4-202ENST00000476842 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
SMIM4-202ENST00000476842 DEFB4AO15263 64 aa12.85□□□□□ -0.35
SMIM4-202ENST00000476842 TPT1P13693 172 aaKnown RBP12.85□□□□□ -0.35
SMIM4-202ENST00000476842 CD300CQ08708 224 aa12.85□□□□□ -0.35
SMIM4-202ENST00000476842 STOML3Q8TAV4 291 aa12.85□□□□□ -0.35
SMIM4-202ENST00000476842 IGKV2-40A0A087WW87 121 aaPredicted RBP12.84□□□□□ -0.35
SMIM4-202ENST00000476842 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
SMIM4-202ENST00000476842 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
SMIM4-202ENST00000476842 IGKV2D-40P01614 121 aaPredicted RBP12.84□□□□□ -0.35
SMIM4-202ENST00000476842 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
SMIM4-202ENST00000476842 LEPP41159 167 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms