RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 FCN2Q15485 313 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 GUK1Q16774 197 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 LGALS9BQ3B8N2 356 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 RNF212Q495C1 297 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 TMEM88Q6PEY1 159 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 PFDN5Q99471 154 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
SEC13-214ENST00000476597 UBE2L5PA0A1B0GUS4 154 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 CBY3A6NI87 242 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 H7BYZ3 331 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 ZNF253O75346 499 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 UPK1BO75841 260 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 SIX6O95475 246 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 DEFB130BP0DP73 79 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 DEFB130AP0DP74 79 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 ZNF493Q6ZR52 646 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 OR10J6PQ8NGY7 276 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 C20orf144Q9BQM9 153 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 GPN1Q9HCN4 374 aaPredicted RBP7.61□□□□□ -1.19
SEC13-214ENST00000476597 ZNF586Q9NXT0 402 aa7.61□□□□□ -1.19
SEC13-214ENST00000476597 TRBV19A0A075B6N1 114 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 M0R2N4 97 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 MPDU1O75352 247 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 RLN2P04090 185 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 CT45A10P0DMU9 189 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 HIST1H1EP10412 219 aaKnown RBP7.6□□□□□ -1.19
SEC13-214ENST00000476597 HTN1P15515 57 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 FGF7P21781 194 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 NHLH2Q02577 135 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 UBE2DNLQ8IWF7 75 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 C15orf53Q8NAA6 179 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 ENKURQ8TC29 256 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 RNASE8Q8TDE3 154 aaKnown RBP7.6□□□□□ -1.19
SEC13-214ENST00000476597 C16orf74Q96GX8 76 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
SEC13-214ENST00000476597 NMES1Q9C002 83 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 TMEM14CQ9P0S9 112 aa7.6□□□□□ -1.19
SEC13-214ENST00000476597 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
SEC13-214ENST00000476597 E5RGE8 158 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 NPIPB6E9PJ23 425 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 INMT-MINDY4F8WBC2 141 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 H0YIZ8 118 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 RTL8CO15255 209 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 PRAF2O60831 178 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 NDUFB4O95168 129 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 ATP5G1P05496 136 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 ATP5G3P48201 142 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 GFI1BQ5VTD9 330 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 Q6ZR54 194 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 OR5C1Q8NGR4 320 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 TMEM263Q8WUH6 116 aaKnown RBP7.59□□□□□ -1.19
SEC13-214ENST00000476597 MRPL53Q96EL3 112 aaKnown RBP7.59□□□□□ -1.19
SEC13-214ENST00000476597 ODF3Q96PU9 254 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 NPCDR1Q9BY65 106 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 SLC25A31Q9H0C2 315 aa7.59□□□□□ -1.19
SEC13-214ENST00000476597 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
SEC13-214ENST00000476597 A0A1B0GVY2 172 aa7.58□□□□□ -1.2
SEC13-214ENST00000476597 F5H768 121 aa7.58□□□□□ -1.2
SEC13-214ENST00000476597 CYCSP99999 105 aaKnown RBP7.58□□□□□ -1.2
SEC13-214ENST00000476597 PDE6HQ13956 83 aa7.58□□□□□ -1.2
SEC13-214ENST00000476597 GCSAMLQ5JQS6 135 aa7.58□□□□□ -1.2
SEC13-214ENST00000476597 CCDC28AQ8IWP9 274 aa7.58□□□□□ -1.2
SEC13-214ENST00000476597 OR5AC2Q9NZP5 309 aa7.58□□□□□ -1.2
SEC13-214ENST00000476597 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 PRSS29PA6NIE9 313 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 M0R3E3 92 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 PYYP10082 97 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 LEPP41159 167 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 FAM3BP58499 235 aaPredicted RBP7.57□□□□□ -1.2
SEC13-214ENST00000476597 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 THAP6Q8TBB0 222 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 FAM167A-AS1Q96KT0 104 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 MARVELD1Q9BSK0 173 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 PTTG2Q9NZH5 202 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 PRELID1Q9Y255 219 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 TIMM9Q9Y5J7 89 aa7.57□□□□□ -1.2
SEC13-214ENST00000476597 TRAV12-3A0A0B4J271 114 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 J3KRW8 73 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 H2BFSP57053 126 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 ERCC8Q13216 396 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 LRRC37A5PQ49AS3 106 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 EXOC3-AS1Q8N2X6 119 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 FAM19A4Q96LR4 140 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 SLC25A2Q9BXI2 301 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 WDR61Q9GZS3 305 aaKnown RBP7.56□□□□□ -1.2
SEC13-214ENST00000476597 AGPAT4-IT1Q9H0P7 198 aa7.56□□□□□ -1.2
SEC13-214ENST00000476597 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
SEC13-214ENST00000476597 NUDT3O95989 172 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 SLC25A5P05141 298 aaKnown RBP7.55□□□□□ -1.2
SEC13-214ENST00000476597 NBEAP1P0C6P0 100 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 CLINT1Q14677 625 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 C9orf47Q6ZRZ4 202 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 MIR17HGQ75NE6 70 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 BLNKQ8WV28 456 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 RNF141Q8WVD5 230 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 PPP1R1CQ8WVI7 109 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 PYGO2Q9BRQ0 406 aa7.55□□□□□ -1.2
SEC13-214ENST00000476597 ATG101Q9BSB4 218 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms