RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 HMGB3O15347 200 aaKnown RBP21.67■■□□□ 1.06
HOXB3-208ENST00000476342 IGKV3-20P01619 116 aa21.67■■□□□ 1.06
HOXB3-208ENST00000476342 BAP18Q8IXM2 172 aa21.67■■□□□ 1.06
HOXB3-208ENST00000476342 OR8A1Q8NGG7 326 aa21.67■■□□□ 1.06
HOXB3-208ENST00000476342 PRELID1Q9Y255 219 aa21.67■■□□□ 1.06
HOXB3-208ENST00000476342 C4BPBP20851 252 aa21.66■■□□□ 1.06
HOXB3-208ENST00000476342 STOML3Q8TAV4 291 aa21.66■■□□□ 1.06
HOXB3-208ENST00000476342 MRPL53Q96EL3 112 aaKnown RBP21.66■■□□□ 1.06
HOXB3-208ENST00000476342 ARL14EPLP0DKL9 152 aa21.65■■□□□ 1.06
HOXB3-208ENST00000476342 CNN1P51911 297 aaKnown RBP21.65■■□□□ 1.06
HOXB3-208ENST00000476342 PHYHIPLQ96FC7 376 aa21.65■■□□□ 1.06
HOXB3-208ENST00000476342 C1QTNF4Q9BXJ3 329 aa21.65■■□□□ 1.06
HOXB3-208ENST00000476342 CTXND1A0A1B0GTU2 59 aa21.64■■□□□ 1.06
HOXB3-208ENST00000476342 ZNF705FA8MVS1 300 aaPredicted RBP21.64■■□□□ 1.06
HOXB3-208ENST00000476342 SPRY2O43597 315 aa21.64■■□□□ 1.06
HOXB3-208ENST00000476342 HIST1H1AQ02539 215 aaPredicted RBP21.64■■□□□ 1.06
HOXB3-208ENST00000476342 LYPD1Q8N2G4 141 aa21.64■■□□□ 1.06
HOXB3-208ENST00000476342 RNF183Q96D59 192 aa21.64■■□□□ 1.06
HOXB3-208ENST00000476342 OVOL2Q9BRP0 275 aa21.64■■□□□ 1.06
HOXB3-208ENST00000476342 EXOC3-AS1Q8N2X6 119 aa21.63■■□□□ 1.05
HOXB3-208ENST00000476342 TENM3Q9P273 2699 aa21.63■■□□□ 1.05
HOXB3-208ENST00000476342 A8MTW9 85 aa21.63■■□□□ 1.05
HOXB3-208ENST00000476342 CXorf1O96002 111 aa21.63■■□□□ 1.05
HOXB3-208ENST00000476342 ZNF705DP0CH99 300 aaPredicted RBP21.63■■□□□ 1.05
HOXB3-208ENST00000476342 ZNF705BP0CI00 300 aaPredicted RBP21.63■■□□□ 1.05
HOXB3-208ENST00000476342 ICAM4Q14773 271 aa21.63■■□□□ 1.05
HOXB3-208ENST00000476342 OR10J6PQ8NGY7 276 aa21.63■■□□□ 1.05
HOXB3-208ENST00000476342 UMAD1C9J7I0 102 aa21.62■■□□□ 1.05
HOXB3-208ENST00000476342 GIG44P09565 113 aaPredicted RBP21.62■■□□□ 1.05
HOXB3-208ENST00000476342 RANP62826 216 aaKnown RBP21.62■■□□□ 1.05
HOXB3-208ENST00000476342 C9orf62Q8N4C0 152 aa21.62■■□□□ 1.05
HOXB3-208ENST00000476342 M0R3E3 92 aa21.61■■□□□ 1.05
HOXB3-208ENST00000476342 SLC51BQ86UW2 128 aa21.61■■□□□ 1.05
HOXB3-208ENST00000476342 Q9H3A6 140 aa21.61■■□□□ 1.05
HOXB3-208ENST00000476342 ZNF726P1Q15940 193 aa21.6■■□□□ 1.05
HOXB3-208ENST00000476342 EIF5AL1Q6IS14 154 aaKnown RBP21.6■■□□□ 1.05
HOXB3-208ENST00000476342 SSX7Q7RTT5 188 aa21.6■■□□□ 1.05
HOXB3-208ENST00000476342 TMEM167BQ9NRX6 74 aa21.6■■□□□ 1.05
HOXB3-208ENST00000476342 PPP1R14DQ9NXH3 145 aa21.6■■□□□ 1.05
HOXB3-208ENST00000476342 XCL2Q9UBD3 114 aa21.6■■□□□ 1.05
HOXB3-208ENST00000476342 PRAC2D3DTV9 90 aa21.59■■□□□ 1.05
HOXB3-208ENST00000476342 GCHFRP30047 84 aa21.59■■□□□ 1.05
HOXB3-208ENST00000476342 TMED6Q8WW62 240 aa21.59■■□□□ 1.05
HOXB3-208ENST00000476342 SLC35B3Q9H1N7 401 aa21.59■■□□□ 1.05
HOXB3-208ENST00000476342 PRB4P10163 310 aaPredicted RBP21.58■■□□□ 1.05
HOXB3-208ENST00000476342 FAM74A1Q5RGS3 127 aa21.58■■□□□ 1.05
HOXB3-208ENST00000476342 AMTNQ6UX39 209 aa21.58■■□□□ 1.05
HOXB3-208ENST00000476342 STAB2Q8WWQ8 2551 aa21.58■■□□□ 1.04
HOXB3-208ENST00000476342 CSN1S1P47710 185 aa21.57■■□□□ 1.04
HOXB3-208ENST00000476342 FXYD7P58549 80 aa21.57■■□□□ 1.04
HOXB3-208ENST00000476342 IQCF2Q8IXL9 164 aa21.57■■□□□ 1.04
HOXB3-208ENST00000476342 OTORQ9NRC9 128 aa21.57■■□□□ 1.04
HOXB3-208ENST00000476342 AMBPP02760 352 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 DPPA3Q6W0C5 159 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 SUN5Q8TC36 379 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 RARRES2Q99969 163 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 MAP1LC3B2A6NCE7 125 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 BOLA2-SMG1P6H3BVE0 249 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 CSNK1G2-AS1Q8NCQ2 148 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 OR11H2Q8NH07 326 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 RXFP4Q8TDU9 374 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 MAP1LC3BQ9GZQ8 125 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 PLA2G2EQ9NZK7 142 aa21.55■■□□□ 1.04
HOXB3-208ENST00000476342 FAM213BQ8TBF2 198 aa21.54■■□□□ 1.04
HOXB3-208ENST00000476342 PGPA6NDG6 321 aa21.53■■□□□ 1.04
HOXB3-208ENST00000476342 NPIPB6E9PJ23 425 aa21.53■■□□□ 1.04
HOXB3-208ENST00000476342 FHITP49789 147 aa21.53■■□□□ 1.04
HOXB3-208ENST00000476342 SPINK13Q1W4C9 94 aa21.53■■□□□ 1.04
HOXB3-208ENST00000476342 CMTM2Q8TAZ6 248 aa21.53■■□□□ 1.04
HOXB3-208ENST00000476342 M0R2Z0 102 aa21.52■■□□□ 1.04
HOXB3-208ENST00000476342 NKX2-5P52952 324 aaPredicted RBP21.52■■□□□ 1.04
HOXB3-208ENST00000476342 FGF8P55075 233 aaPredicted RBP21.52■■□□□ 1.04
HOXB3-208ENST00000476342 RAB5CP51148 216 aa21.51■■□□□ 1.03
HOXB3-208ENST00000476342 LINC00477Q96M19 166 aa21.5■■□□□ 1.03
HOXB3-208ENST00000476342 WWC2-AS2Q96NR7 200 aa21.5■■□□□ 1.03
HOXB3-208ENST00000476342 ODF3Q96PU9 254 aa21.5■■□□□ 1.03
HOXB3-208ENST00000476342 IGKV2-40A0A087WW87 121 aaPredicted RBP21.49■■□□□ 1.03
HOXB3-208ENST00000476342 IGKV2D-40P01614 121 aaPredicted RBP21.49■■□□□ 1.03
HOXB3-208ENST00000476342 TSPOP30536 169 aa21.49■■□□□ 1.03
HOXB3-208ENST00000476342 CDKN1BP46527 198 aa21.49■■□□□ 1.03
HOXB3-208ENST00000476342 ARL6IP6Q8N6S5 226 aa21.49■■□□□ 1.03
HOXB3-208ENST00000476342 IGF2BP2-AS1Q96M15 143 aa21.49■■□□□ 1.03
HOXB3-208ENST00000476342 ZNF705EA8MWA4 302 aaPredicted RBP21.48■■□□□ 1.03
HOXB3-208ENST00000476342 INSP01308 110 aa21.48■■□□□ 1.03
HOXB3-208ENST00000476342 TMEM78Q5T7P6 136 aa21.48■■□□□ 1.03
HOXB3-208ENST00000476342 C9orf47Q6ZRZ4 202 aa21.48■■□□□ 1.03
HOXB3-208ENST00000476342 TMPRSS5Q9H3S3 457 aa21.48■■□□□ 1.03
HOXB3-208ENST00000476342 GOLT1BQ9Y3E0 138 aa21.48■■□□□ 1.03
HOXB3-208ENST00000476342 A0A1W2PRE2 83 aa21.47■■□□□ 1.03
HOXB3-208ENST00000476342 RBAKDNA6NC62 111 aa21.47■■□□□ 1.03
HOXB3-208ENST00000476342 ERCC8Q13216 396 aa21.47■■□□□ 1.03
HOXB3-208ENST00000476342 SFT2D1Q8WV19 159 aa21.47■■□□□ 1.03
HOXB3-208ENST00000476342 MBD3L1Q8WWY6 194 aa21.47■■□□□ 1.03
HOXB3-208ENST00000476342 EDA2RQ9HAV5 297 aa21.47■■□□□ 1.03
HOXB3-208ENST00000476342 DIRC3C9JPN6 131 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 SLC25A5P05141 298 aaKnown RBP21.46■■□□□ 1.03
HOXB3-208ENST00000476342 CT45A10P0DMU9 189 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 LEPP41159 167 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 AGPAT4-IT1Q9H0P7 198 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 CRXO43186 299 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms