RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 ZNF705GA8MUZ8 300 aaPredicted RBP15.11■□□□□ 0.01
LIME1-204ENST00000476183 PET100P0DJ07 73 aa15.11■□□□□ 0.01
LIME1-204ENST00000476183 PYYP10082 97 aa15.11■□□□□ 0.01
LIME1-204ENST00000476183 FAM222AQ5U5X8 452 aa15.11■□□□□ 0.01
LIME1-204ENST00000476183 ATP5SQ99766 215 aa15.11■□□□□ 0.01
LIME1-204ENST00000476183 SLC25A2Q9BXI2 301 aa15.11■□□□□ 0.01
LIME1-204ENST00000476183 PLA2G2EQ9NZK7 142 aa15.11■□□□□ 0.01
LIME1-204ENST00000476183 TRBV19A0A075B6N1 114 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 DEFB131BA0A096LNP1 70 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 NDUFB4O95168 129 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 RPL12P30050 165 aaKnown RBP15.1■□□□□ 0.01
LIME1-204ENST00000476183 MIR17HGQ75NE6 70 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 FAM167A-AS1Q96KT0 104 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
LIME1-204ENST00000476183 SMIM3Q9BZL3 60 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 PPP1R14DQ9NXH3 145 aa15.1■□□□□ 0.01
LIME1-204ENST00000476183 YTHDF2Q9Y5A9 579 aaKnown RBP15.1■□□□□ 0.01
LIME1-204ENST00000476183 ZNF253O75346 499 aa15.09■□□□□ 0.01
LIME1-204ENST00000476183 HIST1H1EP10412 219 aaKnown RBP15.09■□□□□ 0.01
LIME1-204ENST00000476183 TCTAP57738 103 aa15.09■□□□□ 0.01
LIME1-204ENST00000476183 KIR3DS1Q14943 382 aa15.09■□□□□ 0.01
LIME1-204ENST00000476183 DNAH10Q8IVF4 4471 aa15.08■□□□□ 0.01
LIME1-204ENST00000476183 IGHV4-4A0A075B6R2 117 aa15.08■□□□□ 0
LIME1-204ENST00000476183 RPP25LQ8N5L8 163 aaKnown RBP15.08■□□□□ 0
LIME1-204ENST00000476183 OR10J6PQ8NGY7 276 aa15.08■□□□□ 0
LIME1-204ENST00000476183 WFDC1Q9HC57 220 aa15.08■□□□□ 0
LIME1-204ENST00000476183 M0R3E3 92 aa15.07■□□□□ 0
LIME1-204ENST00000476183 AZU1P20160 251 aa15.07■□□□□ 0
LIME1-204ENST00000476183 CDKN1BP46527 198 aa15.07■□□□□ 0
LIME1-204ENST00000476183 FCN2Q15485 313 aa15.07■□□□□ 0
LIME1-204ENST00000476183 KCNIP2Q9NS61 270 aa15.07■□□□□ 0
LIME1-204ENST00000476183 BLNKQ8WV28 456 aa15.06■□□□□ 0
LIME1-204ENST00000476183 LINC01587Q99440 93 aa15.06■□□□□ 0
LIME1-204ENST00000476183 NIPSNAP3BQ9BS92 247 aa15.06■□□□□ 0
LIME1-204ENST00000476183 FRAS1Q86XX4 4008 aa15.06■□□□□ 0
LIME1-204ENST00000476183 TEX48A0A1B0GUV7 120 aa15.05■□□□□ -0
LIME1-204ENST00000476183 PLAC8L1A1L4L8 177 aa15.05■□□□□ -0
LIME1-204ENST00000476183 NPIPB6E9PJ23 425 aa15.05■□□□□ -0
LIME1-204ENST00000476183 C17orf112F2Z3M2 114 aa15.05■□□□□ -0
LIME1-204ENST00000476183 CT45A10P0DMU9 189 aa15.05■□□□□ -0
LIME1-204ENST00000476183 PDE6HQ13956 83 aa15.05■□□□□ -0
LIME1-204ENST00000476183 EXOC3-AS1Q8N2X6 119 aa15.05■□□□□ -0
LIME1-204ENST00000476183 MRPL53Q96EL3 112 aaKnown RBP15.05■□□□□ -0
LIME1-204ENST00000476183 MRPL32Q9BYC8 188 aaKnown RBP15.05■□□□□ -0
LIME1-204ENST00000476183 FUT9Q9Y231 359 aa15.05■□□□□ -0
LIME1-204ENST00000476183 TIMM9Q9Y5J7 89 aa15.05■□□□□ -0
LIME1-204ENST00000476183 TSPOP30536 169 aa15.04■□□□□ -0
LIME1-204ENST00000476183 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
LIME1-204ENST00000476183 FXYD5Q96DB9 178 aa15.04■□□□□ -0
LIME1-204ENST00000476183 MED28Q9H204 178 aa15.04■□□□□ -0
LIME1-204ENST00000476183 OR51M1Q9H341 326 aa15.04■□□□□ -0
LIME1-204ENST00000476183 IFNA5P01569 189 aa15.03■□□□□ -0
LIME1-204ENST00000476183 TAS2R60P59551 318 aa15.03■□□□□ -0
LIME1-204ENST00000476183 OXA1LQ15070 435 aa15.03■□□□□ -0
LIME1-204ENST00000476183 FFAR4Q5NUL3 377 aa15.03■□□□□ -0
LIME1-204ENST00000476183 GFI1BQ5VTD9 330 aa15.03■□□□□ -0
LIME1-204ENST00000476183 SCGB1C1Q8TD33 95 aa15.03■□□□□ -0
LIME1-204ENST00000476183 ZNF503Q96F45 646 aa15.03■□□□□ -0
LIME1-204ENST00000476183 PAXXQ9BUH6 204 aa15.03■□□□□ -0
LIME1-204ENST00000476183 OR10J4P0C629 311 aa15.02■□□□□ -0
LIME1-204ENST00000476183 NBEAP1P0C6P0 100 aa15.02■□□□□ -0
LIME1-204ENST00000476183 ERCC8Q13216 396 aa15.02■□□□□ -0
LIME1-204ENST00000476183 PRELID1Q9Y255 219 aa15.02■□□□□ -0
LIME1-204ENST00000476183 BIRC6Q9NR09 4857 aa15.02□□□□□ -0.01
LIME1-204ENST00000476183 J3KRW8 73 aa15.01□□□□□ -0.01
LIME1-204ENST00000476183 HTN1P15515 57 aa15.01□□□□□ -0.01
LIME1-204ENST00000476183 DAD1P61803 113 aa15.01□□□□□ -0.01
LIME1-204ENST00000476183 ICAM4Q14773 271 aa15.01□□□□□ -0.01
LIME1-204ENST00000476183 Q5BKY6 102 aa15.01□□□□□ -0.01
LIME1-204ENST00000476183 ODF3Q96PU9 254 aa15.01□□□□□ -0.01
LIME1-204ENST00000476183 EIF3GO75821 320 aaKnown RBP eCLIP15□□□□□ -0.01
LIME1-204ENST00000476183 HTN3P15516 51 aa15□□□□□ -0.01
LIME1-204ENST00000476183 RNF141Q8WVD5 230 aa15□□□□□ -0.01
LIME1-204ENST00000476183 PHYHIPLQ96FC7 376 aa15□□□□□ -0.01
LIME1-204ENST00000476183 C20orf144Q9BQM9 153 aa15□□□□□ -0.01
LIME1-204ENST00000476183 NDUFAF3Q9BU61 184 aa15□□□□□ -0.01
LIME1-204ENST00000476183 LYRM9A8MSI8 78 aa14.99□□□□□ -0.01
LIME1-204ENST00000476183 H7BYZ3 331 aa14.99□□□□□ -0.01
LIME1-204ENST00000476183 LEPP41159 167 aa14.99□□□□□ -0.01
LIME1-204ENST00000476183 FAM122CQ6P4D5 195 aa14.99□□□□□ -0.01
LIME1-204ENST00000476183 AGPAT4-IT1Q9H0P7 198 aa14.99□□□□□ -0.01
LIME1-204ENST00000476183 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
LIME1-204ENST00000476183 IGKV2-40A0A087WW87 121 aaPredicted RBP14.98□□□□□ -0.01
LIME1-204ENST00000476183 OR7C2O60412 319 aa14.98□□□□□ -0.01
LIME1-204ENST00000476183 IGKV2D-40P01614 121 aaPredicted RBP14.98□□□□□ -0.01
LIME1-204ENST00000476183 RNASE8Q8TDE3 154 aaKnown RBP14.98□□□□□ -0.01
LIME1-204ENST00000476183 C16orf74Q96GX8 76 aa14.98□□□□□ -0.01
LIME1-204ENST00000476183 FAM19A4Q96LR4 140 aa14.98□□□□□ -0.01
LIME1-204ENST00000476183 LINC00477Q96M19 166 aa14.97□□□□□ -0.01
LIME1-204ENST00000476183 AQP10Q96PS8 301 aa14.97□□□□□ -0.01
LIME1-204ENST00000476183 TRAV12-3A0A0B4J271 114 aa14.96□□□□□ -0.01
LIME1-204ENST00000476183 GIPP09681 153 aaPredicted RBP14.96□□□□□ -0.01
LIME1-204ENST00000476183 DEFB130BP0DP73 79 aa14.96□□□□□ -0.01
LIME1-204ENST00000476183 DEFB130AP0DP74 79 aa14.96□□□□□ -0.01
LIME1-204ENST00000476183 ZNF493Q6ZR52 646 aa14.96□□□□□ -0.01
LIME1-204ENST00000476183 C9orf47Q6ZRZ4 202 aa14.96□□□□□ -0.01
LIME1-204ENST00000476183 TMEM263Q8WUH6 116 aaKnown RBP14.96□□□□□ -0.01
LIME1-204ENST00000476183 VGLL1Q99990 258 aa14.96□□□□□ -0.01
LIME1-204ENST00000476183 KLLNB2CW77 178 aa14.95□□□□□ -0.02
LIME1-204ENST00000476183 RAB2AP61019 212 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms