RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 CHEK1O14757 476 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 RPLP1P05386 114 aaKnown RBP12.93□□□□□ -0.34
TVP23B-202ENST00000476139 PAX8Q06710 450 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 MUC21Q5SSG8 566 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 RBPMS2Q6ZRY4 209 aaKnown RBP12.93□□□□□ -0.34
TVP23B-202ENST00000476139 LYPD1Q8N2G4 141 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 NPIPB6E9PJ23 425 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 TMEM75Q8N9X5 138 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 FAM110DQ8TAY7 271 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-202ENST00000476139 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 KLF5Q13887 457 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-202ENST00000476139 ZNF502Q8TBZ5 544 aa12.93□□□□□ -0.34
TVP23B-202ENST00000476139 TRAV40A0A0B4J280 105 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 ATP5L2Q7Z4Y8 100 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 C5orf56Q8N8D9 126 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 NRGNQ92686 78 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 CT83Q5H943 113 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 CLEC19AQ6UXS0 136 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 PIFOQ8TCI5 191 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 RABAC1Q9UI14 185 aa12.92□□□□□ -0.34
TVP23B-202ENST00000476139 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 IGHV4-30-2A0A087WSY4 118 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-202ENST00000476139 C2orf70A6NJV1 201 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 K7EQM0 130 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-202ENST00000476139 ATP5J2P56134 94 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 ZFP30Q9Y2G7 519 aa12.91□□□□□ -0.34
TVP23B-202ENST00000476139 IGHV4-38-2P0DP08 117 aa12.9□□□□□ -0.34
TVP23B-202ENST00000476139 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
TVP23B-202ENST00000476139 C10orf105Q8TEF2 133 aa12.9□□□□□ -0.34
TVP23B-202ENST00000476139 PIMREGQ9BSJ6 248 aa12.9□□□□□ -0.34
TVP23B-202ENST00000476139 TMEM208Q9BTX3 173 aa12.9□□□□□ -0.34
TVP23B-202ENST00000476139 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
TVP23B-202ENST00000476139 PDE6HQ13956 83 aa12.9□□□□□ -0.34
TVP23B-202ENST00000476139 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.34
TVP23B-202ENST00000476139 M0QZK8 103 aa12.9□□□□□ -0.35
TVP23B-202ENST00000476139 RPL7P18124 248 aaKnown RBP12.9□□□□□ -0.35
TVP23B-202ENST00000476139 Q6ZVH6 145 aa12.9□□□□□ -0.35
TVP23B-202ENST00000476139 S100A7AQ86SG5 101 aa12.9□□□□□ -0.35
TVP23B-202ENST00000476139 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.35
TVP23B-202ENST00000476139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.35
TVP23B-202ENST00000476139 FBN2P35556 2912 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 IGHG4P01861 327 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 PRB1P04280 392 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 STPG4Q8N801 248 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 PMCHL2Q9BQD1 86 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 IGHV1-24A0A0C4DH33 117 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 NPSP0C0P6 89 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 IGLL1P15814 213 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 HINT1P49773 126 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-202ENST00000476139 ZNF124Q15973 351 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 USP24Q9UPU5 2620 aa12.89□□□□□ -0.35
TVP23B-202ENST00000476139 LOC102724200A0A096LPH7 203 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-202ENST00000476139 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
TVP23B-202ENST00000476139 C16orf54Q6UWD8 224 aa12.88□□□□□ -0.35
TVP23B-202ENST00000476139 POLQO75417 2590 aa12.88□□□□□ -0.35
TVP23B-202ENST00000476139 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-202ENST00000476139 Q8TAT8 98 aa12.88□□□□□ -0.35
TVP23B-202ENST00000476139 ZFAND3Q9H8U3 227 aa12.88□□□□□ -0.35
TVP23B-202ENST00000476139 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
TVP23B-202ENST00000476139 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
TVP23B-202ENST00000476139 VGLL1Q99990 258 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 ZANQ9Y493 2812 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 LINC00614P0C842 121 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 CSN1S1P47710 185 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 PSG9Q00887 426 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 LY6EQ16553 131 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.87□□□□□ -0.35
TVP23B-202ENST00000476139 CLPSL1A2RUU4 121 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 CLEC2AQ6UVW9 174 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 TMEM70Q9BUB7 260 aa12.87□□□□□ -0.35
TVP23B-202ENST00000476139 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 hDV102S1A0JD36 115 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 FAM231BA6NCW3 169 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 BUB3O43684 328 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 SCGB2A1O75556 95 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 LAMTOR2Q9Y2Q5 125 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 USP9YO00507 2555 aaPredicted RBP12.86□□□□□ -0.35
TVP23B-202ENST00000476139 A0A1B0GUT8 65 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 SERTM2A0A1B0GWG4 89 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 CSPG4Q6UVK1 2322 aa12.86□□□□□ -0.35
TVP23B-202ENST00000476139 TRAV9-2A0A087WT02 112 aa12.85□□□□□ -0.35
TVP23B-202ENST00000476139 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
TVP23B-202ENST00000476139 OR4C46A6NHA9 309 aa12.85□□□□□ -0.35
TVP23B-202ENST00000476139 RELQ04864 619 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-202ENST00000476139 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms