RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TEPPQ6URK8 271 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 NFE4Q86UQ8 179 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 MCFD2Q8NI22 146 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 GSN-AS1Q9NRJ2 163 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 CCDC59Q9P031 241 aaKnown RBP13.98□□□□□ -0.17
VPS36-203ENST00000475375 FUT9Q9Y231 359 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 ICOSQ9Y6W8 199 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 SRRM2Q9UQ35 2752 aaKnown RBP13.98□□□□□ -0.17
VPS36-203ENST00000475375 VPS13BQ7Z7G8 4022 aa13.98□□□□□ -0.17
VPS36-203ENST00000475375 PAX4O43316 350 aa13.97□□□□□ -0.17
VPS36-203ENST00000475375 CT45A10P0DMU9 189 aa13.97□□□□□ -0.17
VPS36-203ENST00000475375 AP3S2P59780 193 aa13.97□□□□□ -0.17
VPS36-203ENST00000475375 ICAM4Q14773 271 aa13.97□□□□□ -0.17
VPS36-203ENST00000475375 PXDC1Q5TGL8 231 aa13.97□□□□□ -0.17
VPS36-203ENST00000475375 PXMP4Q9Y6I8 212 aa13.97□□□□□ -0.17
VPS36-203ENST00000475375 A0A087WTM6 91 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 COX7A2P2O60397 106 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 METTL15P1P0C7V9 234 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 ID3Q02535 119 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 ZNF546Q86UE3 836 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 TOMM5Q8N4H5 51 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 ZBTB8BQ8NAP8 495 aaPredicted RBP13.96□□□□□ -0.17
VPS36-203ENST00000475375 ZNF680Q8NEM1 530 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 ZNF431Q8TF32 576 aaPredicted RBP13.96□□□□□ -0.17
VPS36-203ENST00000475375 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
VPS36-203ENST00000475375 SLC25A21Q9BQT8 299 aaPredicted RBP13.96□□□□□ -0.17
VPS36-203ENST00000475375 FAM229AH3BQW9 127 aa13.95□□□□□ -0.18
VPS36-203ENST00000475375 K7EPK0 472 aa13.95□□□□□ -0.18
VPS36-203ENST00000475375 TNFSF8P32971 234 aa13.95□□□□□ -0.18
VPS36-203ENST00000475375 OR10P1Q8NGE3 313 aa13.95□□□□□ -0.18
VPS36-203ENST00000475375 DYNC2LI1Q8TCX1 351 aa13.95□□□□□ -0.18
VPS36-203ENST00000475375 TRAV9-2A0A087WT02 112 aa13.94□□□□□ -0.18
VPS36-203ENST00000475375 NPIPB6E9PJ23 425 aa13.94□□□□□ -0.18
VPS36-203ENST00000475375 IGHV3-53P01767 116 aa13.94□□□□□ -0.18
VPS36-203ENST00000475375 SMIM8Q96KF7 97 aa13.94□□□□□ -0.18
VPS36-203ENST00000475375 ODF3Q96PU9 254 aa13.94□□□□□ -0.18
VPS36-203ENST00000475375 FNDC10F2Z333 226 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 AGPAT2O15120 278 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 SCGB1D2O95969 90 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 GCSHP23434 173 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 OPCMLQ14982 345 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 PYDC2Q56P42 97 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 SOSTQ9BQB4 213 aa13.93□□□□□ -0.18
VPS36-203ENST00000475375 C7orf71A4D174 169 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 H3BQ15 152 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 ZNF324O75467 553 aaPredicted RBP13.92□□□□□ -0.18
VPS36-203ENST00000475375 SLC25A5P05141 298 aaKnown RBP13.92□□□□□ -0.18
VPS36-203ENST00000475375 IGLC2P0DOY2 106 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 HAMPP81172 84 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 MORN5Q5VZ52 161 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 C10orf113Q5VZT2 155 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 C11orf72Q8NBR9 251 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 TRIM63Q969Q1 353 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 LY96Q9Y6Y9 160 aa13.92□□□□□ -0.18
VPS36-203ENST00000475375 J3QL48 77 aa13.91□□□□□ -0.18
VPS36-203ENST00000475375 TMEM14EPQ6UXP3 125 aa13.91□□□□□ -0.18
VPS36-203ENST00000475375 RAB2BQ8WUD1 216 aa13.91□□□□□ -0.18
VPS36-203ENST00000475375 TMEM37Q8WXS4 190 aa13.91□□□□□ -0.18
VPS36-203ENST00000475375 SAT2Q96F10 170 aaPredicted RBP13.91□□□□□ -0.18
VPS36-203ENST00000475375 MRPS26Q9BYN8 205 aaKnown RBP13.91□□□□□ -0.18
VPS36-203ENST00000475375 MSRB1Q9NZV6 116 aa13.91□□□□□ -0.18
VPS36-203ENST00000475375 KLF12Q9Y4X4 402 aa13.91□□□□□ -0.18
VPS36-203ENST00000475375 LYPD5Q6UWN5 251 aa13.9□□□□□ -0.18
VPS36-203ENST00000475375 Q6ZSN1 163 aa13.9□□□□□ -0.18
VPS36-203ENST00000475375 EIF4E3Q8N5X7 224 aaKnown RBP13.9□□□□□ -0.18
VPS36-203ENST00000475375 ST6GAL2Q96JF0 529 aa13.9□□□□□ -0.18
VPS36-203ENST00000475375 PRO0255Q9UI72 69 aa13.9□□□□□ -0.18
VPS36-203ENST00000475375 C9orf170A2RU37 121 aa13.89□□□□□ -0.19
VPS36-203ENST00000475375 RNASE4P34096 147 aaKnown RBP13.89□□□□□ -0.19
VPS36-203ENST00000475375 ERCC8Q13216 396 aa13.89□□□□□ -0.19
VPS36-203ENST00000475375 BTN1A1Q13410 526 aa13.89□□□□□ -0.19
VPS36-203ENST00000475375 MRPL23Q16540 153 aaKnown RBP13.89□□□□□ -0.19
VPS36-203ENST00000475375 GUK1Q16774 197 aa13.89□□□□□ -0.19
VPS36-203ENST00000475375 C8orf49Q96NF6 230 aa13.89□□□□□ -0.19
VPS36-203ENST00000475375 LINC00467Q9BRT7 94 aa13.89□□□□□ -0.19
VPS36-203ENST00000475375 MRPL16Q9NX20 251 aaKnown RBP13.89□□□□□ -0.19
VPS36-203ENST00000475375 TRAV5A0A0B4J249 113 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 SPINK4O60575 86 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 PRAF2O60831 178 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 TCL1AP56279 114 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 CD300CQ08708 224 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 ANXA2RQ3ZCQ2 193 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 NEGR1Q7Z3B1 354 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 MGST2Q99735 147 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 SLIRPQ9GZT3 109 aaKnown RBP13.88□□□□□ -0.19
VPS36-203ENST00000475375 HHLA3Q9XRX5 114 aa13.88□□□□□ -0.19
VPS36-203ENST00000475375 EVI2AP22794 236 aa13.87□□□□□ -0.19
VPS36-203ENST00000475375 UBE2MP61081 183 aaKnown RBP13.87□□□□□ -0.19
VPS36-203ENST00000475375 SLAQ13239 276 aa13.87□□□□□ -0.19
VPS36-203ENST00000475375 Q6ZRG5 221 aa13.87□□□□□ -0.19
VPS36-203ENST00000475375 DNAJC4Q9NNZ3 241 aa13.87□□□□□ -0.19
VPS36-203ENST00000475375 M0R3E3 92 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 RGS13O14921 159 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 NOL3O60936 208 aaKnown RBP13.86□□□□□ -0.19
VPS36-203ENST00000475375 TSC22D2O75157 780 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 MPDU1O75352 247 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 OR4E1P0C645 316 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 CRYBA4P53673 196 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 TAS2R30P59541 319 aa13.86□□□□□ -0.19
VPS36-203ENST00000475375 ARL16Q0P5N6 197 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms