RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
TRAF4-210ENST00000475329 AURKAIP1Q9NWT8 199 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-210ENST00000475329 CLEC5AQ9NY25 188 aa10.44□□□□□ -0.74
TRAF4-210ENST00000475329 TRBV6-1A0A0K0K1D8 114 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 A0A1W2PRX2 142 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 C2orf70A6NJV1 201 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 M0QZ24 198 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 EDN2P20800 178 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 RPL11P62913 178 aaKnown RBP10.43□□□□□ -0.74
TRAF4-210ENST00000475329 SRSF2Q01130 221 aaKnown RBP10.43□□□□□ -0.74
TRAF4-210ENST00000475329 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 Q86TA4 180 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 BAGE2Q86Y30 109 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 ANAPC16Q96DE5 110 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 SMIM12Q96EX1 92 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 CITED2Q99967 270 aaPredicted RBP10.43□□□□□ -0.74
TRAF4-210ENST00000475329 TUBA4BQ9H853 241 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 TMEM242Q9NWH2 141 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 PEMTQ9UBM1 199 aa10.43□□□□□ -0.74
TRAF4-210ENST00000475329 TRAV8-2A0A0B4J237 113 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 A0A1B0GUS0 222 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 H7BYZ3 331 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 K7EN84 100 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 PPP1R2P9O14990 202 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 LTAP01374 205 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 IGLV2-8P01709 118 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 MGST1P10620 155 aaKnown RBP10.42□□□□□ -0.74
TRAF4-210ENST00000475329 HLA-DMBP28068 263 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 PSG3Q16557 428 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 SFRP2Q96HF1 295 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 DUX3Q96PT4 197 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 NRN1Q9NPD7 142 aa10.42□□□□□ -0.74
TRAF4-210ENST00000475329 CXorf65A6NEN9 183 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 FBLL1A6NHQ2 334 aaKnown RBP10.41□□□□□ -0.74
TRAF4-210ENST00000475329 GCGP01275 180 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 CBLN1P23435 193 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 FLI1Q01543 452 aaPredicted RBP10.41□□□□□ -0.74
TRAF4-210ENST00000475329 FHL3Q13643 280 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 HIST2H2BDQ6DRA6 164 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 LCN12Q6JVE5 192 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 PRNTQ86SH4 94 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 OR9G4Q8NGQ1 327 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 RAX2Q96IS3 184 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 SGK494Q96LW2 274 aa10.41□□□□□ -0.74
TRAF4-210ENST00000475329 IGKV2-40A0A087WW87 121 aaPredicted RBP10.4□□□□□ -0.74
TRAF4-210ENST00000475329 TRAV8-1A0A0A6YYK1 113 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 CCL24O00175 119 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 SOCS3O14543 225 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 IGKV2D-40P01614 121 aaPredicted RBP10.4□□□□□ -0.74
TRAF4-210ENST00000475329 FOLR2P14207 255 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 OR10G8Q8NGN5 311 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 BIN3Q9NQY0 253 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 PSG8Q9UQ74 426 aa10.4□□□□□ -0.74
TRAF4-210ENST00000475329 RBAKDNA6NC62 111 aa10.39□□□□□ -0.75
TRAF4-210ENST00000475329 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-210ENST00000475329 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
TRAF4-210ENST00000475329 OR5I1Q13606 314 aa10.39□□□□□ -0.75
TRAF4-210ENST00000475329 TMEM183AQ8IXX5 376 aa10.39□□□□□ -0.75
TRAF4-210ENST00000475329 DLX4Q92988 240 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-210ENST00000475329 MLXQ9UH92 298 aa10.39□□□□□ -0.75
TRAF4-210ENST00000475329 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
TRAF4-210ENST00000475329 NF1P21359 2839 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 IGKV3-7A0A075B6H7 116 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 ID1P41134 155 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 NDUFA11Q86Y39 141 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 ZNF738Q8NE65 137 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 OSTCQ9NRP0 149 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
TRAF4-210ENST00000475329 SETD2Q9BYW2 2564 aaPredicted RBP10.38□□□□□ -0.75
TRAF4-210ENST00000475329 PRAC2D3DTV9 90 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-210ENST00000475329 S100PP25815 95 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
TRAF4-210ENST00000475329 ADAMTSL5Q6ZMM2 481 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-210ENST00000475329 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 C20orf173Q96LM9 149 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 MS4A6AQ9H2W1 248 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 ZNF492Q9P255 531 aa10.37□□□□□ -0.75
TRAF4-210ENST00000475329 COLCA2A8K830 154 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 ADARB2-AS1A8MUL3 147 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 CSN3P07498 182 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 FOXL1Q12952 345 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 PRR27Q6MZM9 219 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 FAM24BQ8N5W8 94 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 DCANP1Q8TF63 244 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 YPEL4Q96NS1 127 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 VGLL1Q99990 258 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms