RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 FAT1Q14517 4588 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 FNDC10F2Z333 226 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 MRPS12O15235 138 aaKnown RBP8.59□□□□□ -1.03
SKA3-206ENST00000475251 PAX4O43316 350 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
SKA3-206ENST00000475251 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
SKA3-206ENST00000475251 TEPPQ6URK8 271 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 LINC00305Q7Z4B0 112 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 ZNF546Q86UE3 836 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
SKA3-206ENST00000475251 PARD6GQ9BYG4 376 aaPredicted RBP8.59□□□□□ -1.03
SKA3-206ENST00000475251 PSENENQ9NZ42 101 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 MGAT4CQ9UBM8 478 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 FUT9Q9Y231 359 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 LY96Q9Y6Y9 160 aa8.59□□□□□ -1.03
SKA3-206ENST00000475251 TRGV1A0A0A0MS02 117 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 J3KRW8 73 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 GOSR2O14653 212 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 SFT2D2O95562 160 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 SLC25A5P05141 298 aaKnown RBP8.58□□□□□ -1.04
SKA3-206ENST00000475251 HOXB5P09067 269 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 PRB4P10163 310 aaPredicted RBP8.58□□□□□ -1.04
SKA3-206ENST00000475251 AP3S2P59780 193 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
SKA3-206ENST00000475251 ZNF431Q8TF32 576 aaPredicted RBP8.58□□□□□ -1.04
SKA3-206ENST00000475251 SLC25A21Q9BQT8 299 aaPredicted RBP8.58□□□□□ -1.04
SKA3-206ENST00000475251 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 MDFICQ9P1T7 246 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
SKA3-206ENST00000475251 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 NPIPB6E9PJ23 425 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 COX7A2P2O60397 106 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 EVI2AP22794 236 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 RRAS2P62070 204 aaPredicted RBP8.57□□□□□ -1.04
SKA3-206ENST00000475251 GUK1Q16774 197 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 ANXA2RQ3ZCQ2 193 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 PATE2Q6UY27 113 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 C11orf72Q8NBR9 251 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 OR10P1Q8NGE3 313 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 ST6GAL2Q96JF0 529 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 MSRB1Q9NZV6 116 aa8.57□□□□□ -1.04
SKA3-206ENST00000475251 CCDC59Q9P031 241 aaKnown RBP8.57□□□□□ -1.04
SKA3-206ENST00000475251 C7orf71A4D174 169 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 PRAC2D3DTV9 90 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 POLR2GP62487 172 aaKnown RBP eCLIP8.56□□□□□ -1.04
SKA3-206ENST00000475251 ID3Q02535 119 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 SLC38A11Q08AI6 406 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 LYPD5Q6UWN5 251 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
SKA3-206ENST00000475251 SMIM8Q96KF7 97 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 TNFRSF18Q9Y5U5 241 aa8.56□□□□□ -1.04
SKA3-206ENST00000475251 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 FABP12A6NFH5 140 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 SLC17A3O00476 420 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 SSSCA1O60232 199 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 SPINK4O60575 86 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
SKA3-206ENST00000475251 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 TCL1AP56279 114 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 PPP1R1AQ13522 171 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 IBA57Q5T440 356 aaKnown RBP8.55□□□□□ -1.04
SKA3-206ENST00000475251 C10orf113Q5VZT2 155 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 NTN5Q8WTR8 489 aaPredicted RBP8.55□□□□□ -1.04
SKA3-206ENST00000475251 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
SKA3-206ENST00000475251 MRPL53Q96EL3 112 aaKnown RBP8.55□□□□□ -1.04
SKA3-206ENST00000475251 LINC00854A0A1B0GVQ3 168 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 AGPAT2O15120 278 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 SRIP30626 198 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 CRYBA4P53673 196 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 UBE2MP61081 183 aaKnown RBP8.54□□□□□ -1.04
SKA3-206ENST00000475251 SPCS2Q15005 226 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 TMEM14EPQ6UXP3 125 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 Q6ZRG5 221 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 MCFD2Q8NI22 146 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 PCNPQ8WW12 178 aaKnown RBP8.54□□□□□ -1.04
SKA3-206ENST00000475251 SAT2Q96F10 170 aaPredicted RBP8.54□□□□□ -1.04
SKA3-206ENST00000475251 VGLL1Q99990 258 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 GGACTQ9BVM4 153 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
SKA3-206ENST00000475251 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
SKA3-206ENST00000475251 KLLNB2CW77 178 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 H3BTX0 84 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 PSCAO43653 123 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 TSC22D2O75157 780 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 ZNF253O75346 499 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 MPDU1O75352 247 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 OR4E1P0C645 316 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 RAB31Q13636 194 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 OPCMLQ14982 345 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 TMEM37Q8WXS4 190 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms