RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 MSMBP08118 114 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 SS18Q15532 418 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
VAPB-204ENST00000475243 TRAV8-3A0A0A6YYJ7 113 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 RNF5Q99942 180 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 C1QTNF4Q9BXJ3 329 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 COLCA2A8K830 154 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 G3V318 75 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 ARMS2P0C7Q2 107 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 PRIMA1Q86XR5 153 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 GATA4P43694 442 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 FAM110DQ8TAY7 271 aaPredicted RBP8.87□□□□□ -0.99
VAPB-204ENST00000475243 RNF114Q9Y508 228 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
VAPB-204ENST00000475243 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 LEPROTO15243 131 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 TNFSF13O75888 250 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 QRFPP83859 136 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 FREM1Q5H8C1 2179 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 TRAV12-2A0A075B6T6 113 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 C2orf82Q6UX34 121 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 MED12LQ86YW9 2145 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 SEC11AP67812 179 aa8.86□□□□□ -0.99
VAPB-204ENST00000475243 DUX4L9Q6RFH8 374 aaPredicted RBP8.86□□□□□ -0.99
VAPB-204ENST00000475243 KIAA1671Q9BY89 1806 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 LGALS1P09382 135 aaKnown RBP8.85□□□□□ -0.99
VAPB-204ENST00000475243 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 CFHR2P36980 270 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 PLXNB1O43157 2135 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 VWC2LB2RUY7 222 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 ZNF562Q6V9R5 426 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 DSCAML1Q8TD84 2053 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 GAGE12JA6NER3 117 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 GAGE1Q13065 139 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 GAGE4Q13068 117 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 GAGE5Q13069 117 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 ESDP10768 282 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 SLC25A16P16260 332 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 SPOCK3Q9BQ16 436 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 C2orf16Q68DN1 1984 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 PTPRQQ9UMZ3 2332 aa8.85□□□□□ -0.99
VAPB-204ENST00000475243 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
VAPB-204ENST00000475243 K7ENP7 123 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 STPG4Q8N801 248 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 PLXNB3Q9ULL4 1909 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 TRAV1-1A0A0B4J248 108 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 SYS1-DBNDD2H3BUS1 97 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 TMEM213A2RRL7 107 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 IGHG3P01860 377 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 RASL11AQ6T310 242 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 NDUFB8O95169 186 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 ZC2HC1BQ5TFG8 222 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 ASPHD1Q5U4P2 390 aa8.84□□□□□ -0.99
VAPB-204ENST00000475243 A0A096LPF7 62 aa8.83□□□□□ -1
VAPB-204ENST00000475243 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
VAPB-204ENST00000475243 DAD1P61803 113 aa8.83□□□□□ -1
VAPB-204ENST00000475243 PFN2P35080 140 aa8.83□□□□□ -1
VAPB-204ENST00000475243 LYPD1Q8N2G4 141 aa8.83□□□□□ -1
VAPB-204ENST00000475243 F8WEM9 126 aa8.83□□□□□ -1
VAPB-204ENST00000475243 GAGE2EQ4V326 116 aa8.83□□□□□ -1
VAPB-204ENST00000475243 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
VAPB-204ENST00000475243 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
VAPB-204ENST00000475243 PLXNA2O75051 1894 aa8.83□□□□□ -1
VAPB-204ENST00000475243 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
VAPB-204ENST00000475243 TNFRSF6BO95407 300 aa8.83□□□□□ -1
VAPB-204ENST00000475243 TRBV6-6A0A0A6YYG2 114 aa8.83□□□□□ -1
VAPB-204ENST00000475243 ANAPC10Q9UM13 185 aa8.83□□□□□ -1
VAPB-204ENST00000475243 CREBBPQ92793 2442 aa8.83□□□□□ -1
VAPB-204ENST00000475243 MPV17L2Q567V2 206 aa8.82□□□□□ -1
VAPB-204ENST00000475243 MYMXA0A1B0GTQ4 84 aa8.82□□□□□ -1
VAPB-204ENST00000475243 GAGE12BA1L429 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 LINC01549A6NIU2 74 aa8.82□□□□□ -1
VAPB-204ENST00000475243 GAGE7O76087 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 GAGE12FP0CL80 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 GAGE12GP0CL81 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 GAGE12IP0CL82 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 LINC01619G3V211 115 aa8.82□□□□□ -1
VAPB-204ENST00000475243 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.82□□□□□ -1
VAPB-204ENST00000475243 AZU1P20160 251 aa8.82□□□□□ -1
VAPB-204ENST00000475243 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
VAPB-204ENST00000475243 NCOA6Q14686 2063 aaPredicted RBP8.82□□□□□ -1
VAPB-204ENST00000475243 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
VAPB-204ENST00000475243 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
VAPB-204ENST00000475243 ZNF114Q8NC26 417 aa8.82□□□□□ -1
VAPB-204ENST00000475243 SHANK2-AS3Q9BTD1 123 aa8.82□□□□□ -1
VAPB-204ENST00000475243 TRAV26-2A0A0B4J265 109 aa8.82□□□□□ -1
VAPB-204ENST00000475243 IGHV1-69DA0A0B4J2H0 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 IGHV1-69P01742 117 aa8.82□□□□□ -1
VAPB-204ENST00000475243 UBE2E1P51965 193 aa8.82□□□□□ -1
VAPB-204ENST00000475243 GAGE2BQ13066 116 aa8.82□□□□□ -1
VAPB-204ENST00000475243 WISP1O95388 367 aa8.82□□□□□ -1
VAPB-204ENST00000475243 CGB3P0DN86 165 aa8.82□□□□□ -1
VAPB-204ENST00000475243 KIR3DS1Q14943 382 aa8.82□□□□□ -1
VAPB-204ENST00000475243 Q86TA4 180 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms