RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 GOLT1BQ9Y3E0 138 aa11.84□□□□□ -0.51
ATG4B-216ENST00000475195 RFNGQ9Y644 331 aa11.84□□□□□ -0.51
ATG4B-216ENST00000475195 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 BOLA2-SMG1P6H3BVE0 249 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 M0R2Z0 102 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 RHOBP62745 196 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 SPINK13Q1W4C9 94 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 RNF141Q8WVD5 230 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 PAXXQ9BUH6 204 aa11.83□□□□□ -0.52
ATG4B-216ENST00000475195 RNF222A6NCQ9 220 aa11.82□□□□□ -0.52
ATG4B-216ENST00000475195 NPIPB6E9PJ23 425 aa11.82□□□□□ -0.52
ATG4B-216ENST00000475195 M6PRP20645 277 aa11.82□□□□□ -0.52
ATG4B-216ENST00000475195 CDKN1BP46527 198 aa11.82□□□□□ -0.52
ATG4B-216ENST00000475195 INO80EQ8NBZ0 244 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-216ENST00000475195 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
ATG4B-216ENST00000475195 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-216ENST00000475195 KLK5Q9Y337 293 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-216ENST00000475195 DNAH1Q9P2D7 4330 aa11.82□□□□□ -0.52
ATG4B-216ENST00000475195 IGHV3OR16-12A0A075B7B8 117 aa11.81□□□□□ -0.52
ATG4B-216ENST00000475195 M0R3E3 92 aa11.81□□□□□ -0.52
ATG4B-216ENST00000475195 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-216ENST00000475195 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
ATG4B-216ENST00000475195 BLNKQ8WV28 456 aa11.81□□□□□ -0.52
ATG4B-216ENST00000475195 ODF3Q96PU9 254 aa11.81□□□□□ -0.52
ATG4B-216ENST00000475195 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 INSP01308 110 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 HBE1P02100 147 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 CT45A10P0DMU9 189 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 PRB4P10163 310 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-216ENST00000475195 TAS2R45P59539 299 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 SERF2P84101 59 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 C12orf74Q32Q52 190 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 EXOC3-AS1Q8N2X6 119 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 PPP1R14DQ9NXH3 145 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 CELA1Q9UNI1 258 aa11.8□□□□□ -0.52
ATG4B-216ENST00000475195 TRAV12-2A0A075B6T6 113 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 OR10J4P0C629 311 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 ATP6V0CP27449 155 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 TSPOP30536 169 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 KHDC3LQ587J8 217 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 BAP18Q8IXM2 172 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 RPP25LQ8N5L8 163 aaKnown RBP11.79□□□□□ -0.52
ATG4B-216ENST00000475195 FAM19A4Q96LR4 140 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 LINC00477Q96M19 166 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
ATG4B-216ENST00000475195 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 OR7C2O60412 319 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 RAB2AP61019 212 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 ICAM4Q14773 271 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 C9orf47Q6ZRZ4 202 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
ATG4B-216ENST00000475195 LOC102723971A0A1B0GUV8 181 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 A0A1W2PPV4 95 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 JTBO76095 146 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 MBP02144 154 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 TCTAP57738 103 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 TAS2R60P59551 318 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 KIR3DS1Q14943 382 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 RPL7L1Q6DKI1 246 aaKnown RBP11.77□□□□□ -0.53
ATG4B-216ENST00000475195 PQLC2Q6ZP29 291 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 Q6ZTC4 211 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 PHYHIPLQ96FC7 376 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.53
ATG4B-216ENST00000475195 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 TAAR5O14804 337 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 PRM2P04554 102 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 RANP62826 216 aaKnown RBP11.76□□□□□ -0.53
ATG4B-216ENST00000475195 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 SUN5Q8TC36 379 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 C2CD4CQ8TF44 421 aa11.76□□□□□ -0.53
ATG4B-216ENST00000475195 HYDINQ4G0P3 5121 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 PLAC8L1A1L4L8 177 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 ZNF705GA8MUZ8 300 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-216ENST00000475195 H7BYZ3 331 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 NMBP08949 121 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 AZU1P20160 251 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 LEPP41159 167 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 UBE2L3P68036 154 aaKnown RBP11.75□□□□□ -0.53
ATG4B-216ENST00000475195 ERCC8Q13216 396 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 GFI1BQ5VTD9 330 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-216ENST00000475195 LINC01587Q99440 93 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 CYTL1Q9NRR1 136 aa11.75□□□□□ -0.53
ATG4B-216ENST00000475195 YTHDF2Q9Y5A9 579 aaKnown RBP11.75□□□□□ -0.53
ATG4B-216ENST00000475195 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
ATG4B-216ENST00000475195 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
ATG4B-216ENST00000475195 HMSDA8MTL9 139 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms