RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TRBV19A0A075B6N1 114 aa17.23■□□□□ 0.35
CPNE1-223ENST00000475146 IGLL5B9A064 214 aa17.23■□□□□ 0.35
CPNE1-223ENST00000475146 PRAC2D3DTV9 90 aa17.23■□□□□ 0.35
CPNE1-223ENST00000475146 SPART-AS1P0CW21 52 aa17.23■□□□□ 0.35
CPNE1-223ENST00000475146 HIST1H1EP10412 219 aaKnown RBP17.23■□□□□ 0.35
CPNE1-223ENST00000475146 BLNKQ8WV28 456 aa17.23■□□□□ 0.35
CPNE1-223ENST00000475146 TIMM9Q9Y5J7 89 aa17.23■□□□□ 0.35
CPNE1-223ENST00000475146 FFAR4Q5NUL3 377 aa17.22■□□□□ 0.35
CPNE1-223ENST00000475146 MRPL32Q9BYC8 188 aaKnown RBP17.22■□□□□ 0.35
CPNE1-223ENST00000475146 CDKN1BP46527 198 aa17.21■□□□□ 0.35
CPNE1-223ENST00000475146 FAM167A-AS1Q96KT0 104 aa17.21■□□□□ 0.35
CPNE1-223ENST00000475146 LYSTQ99698 3801 aa17.21■□□□□ 0.35
CPNE1-223ENST00000475146 YTHDF2Q9Y5A9 579 aaKnown RBP17.21■□□□□ 0.35
CPNE1-223ENST00000475146 TEX48A0A1B0GUV7 120 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 ZNF705GA8MUZ8 300 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-223ENST00000475146 PDE6HQ13956 83 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 RGS21Q2M5E4 152 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 FAM222AQ5U5X8 452 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 RPP25LQ8N5L8 163 aaKnown RBP17.2■□□□□ 0.34
CPNE1-223ENST00000475146 WFDC1Q9HC57 220 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 FUT9Q9Y231 359 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 ALMS1Q8TCU4 4167 aa17.2■□□□□ 0.34
CPNE1-223ENST00000475146 DEFB131BA0A096LNP1 70 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 M0R3E3 92 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 NDUFB4O95168 129 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 MRPL53Q96EL3 112 aaKnown RBP17.19■□□□□ 0.34
CPNE1-223ENST00000475146 LINC01587Q99440 93 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 PARD6GQ9BYG4 376 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-223ENST00000475146 OR51M1Q9H341 326 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 AAMDCQ9H7C9 122 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 DKK2Q9UBU2 259 aa17.19■□□□□ 0.34
CPNE1-223ENST00000475146 PRM2P04554 102 aa17.18■□□□□ 0.34
CPNE1-223ENST00000475146 TSPOP30536 169 aa17.18■□□□□ 0.34
CPNE1-223ENST00000475146 TCTAP57738 103 aa17.18■□□□□ 0.34
CPNE1-223ENST00000475146 PAXXQ9BUH6 204 aa17.18■□□□□ 0.34
CPNE1-223ENST00000475146 PRELID1Q9Y255 219 aa17.18■□□□□ 0.34
CPNE1-223ENST00000475146 PLECQ15149 4684 aaKnown RBP17.18■□□□□ 0.34
CPNE1-223ENST00000475146 OR7C2O60412 319 aa17.17■□□□□ 0.34
CPNE1-223ENST00000475146 OR10J4P0C629 311 aa17.17■□□□□ 0.34
CPNE1-223ENST00000475146 TMEM256Q8N2U0 113 aa17.17■□□□□ 0.34
CPNE1-223ENST00000475146 EXOC3-AS1Q8N2X6 119 aa17.17■□□□□ 0.34
CPNE1-223ENST00000475146 NIPSNAP3BQ9BS92 247 aa17.17■□□□□ 0.34
CPNE1-223ENST00000475146 NPIPB6E9PJ23 425 aa17.16■□□□□ 0.34
CPNE1-223ENST00000475146 GIPP09681 153 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-223ENST00000475146 NBEAP1P0C6P0 100 aa17.16■□□□□ 0.34
CPNE1-223ENST00000475146 IGHV4-4A0A075B6R2 117 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 J3KRW8 73 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 HTN1P15515 57 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 ICAM4Q14773 271 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 LGALS9CQ6DKI2 356 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 RNF141Q8WVD5 230 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 APLNQ9ULZ1 77 aa17.15■□□□□ 0.34
CPNE1-223ENST00000475146 CT45A10P0DMU9 189 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 LEPP41159 167 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 TAS2R60P59551 318 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 KIR3DS1Q14943 382 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 ASB13Q8WXK3 278 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 FXYD5Q96DB9 178 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 PLA2G2EQ9NZK7 142 aa17.14■□□□□ 0.33
CPNE1-223ENST00000475146 TAS2R45P59539 299 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 UBE2L3P68036 154 aaKnown RBP17.13■□□□□ 0.33
CPNE1-223ENST00000475146 ZNF266Q14584 549 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 KHDC3LQ587J8 217 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 Q5BKY6 102 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 GFI1BQ5VTD9 330 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 FAM122CQ6P4D5 195 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 AQP10Q96PS8 301 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 ODF3Q96PU9 254 aa17.13■□□□□ 0.33
CPNE1-223ENST00000475146 AZU1P20160 251 aa17.12■□□□□ 0.33
CPNE1-223ENST00000475146 DAD1P61803 113 aa17.12■□□□□ 0.33
CPNE1-223ENST00000475146 ERCC8Q13216 396 aa17.12■□□□□ 0.33
CPNE1-223ENST00000475146 ACOT6Q3I5F7 207 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-223ENST00000475146 PHYHIPLQ96FC7 376 aa17.12■□□□□ 0.33
CPNE1-223ENST00000475146 C20orf144Q9BQM9 153 aa17.12■□□□□ 0.33
CPNE1-223ENST00000475146 DNAH1Q9P2D7 4330 aa17.11■□□□□ 0.33
CPNE1-223ENST00000475146 H7BYZ3 331 aa17.11■□□□□ 0.33
CPNE1-223ENST00000475146 HTN3P15516 51 aa17.11■□□□□ 0.33
CPNE1-223ENST00000475146 OXA1LQ15070 435 aa17.11■□□□□ 0.33
CPNE1-223ENST00000475146 ZNF503Q96F45 646 aa17.11■□□□□ 0.33
CPNE1-223ENST00000475146 IGKV2-40A0A087WW87 121 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-223ENST00000475146 EIF3GO75821 320 aaKnown RBP eCLIP17.1■□□□□ 0.33
CPNE1-223ENST00000475146 IGKV2D-40P01614 121 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-223ENST00000475146 M6PRP20645 277 aa17.1■□□□□ 0.33
CPNE1-223ENST00000475146 HSD17B11Q8NBQ5 300 aa17.1■□□□□ 0.33
CPNE1-223ENST00000475146 C16orf74Q96GX8 76 aa17.1■□□□□ 0.33
CPNE1-223ENST00000475146 FXYD6-FXYD2A0A087WZ82 144 aa17.09■□□□□ 0.33
CPNE1-223ENST00000475146 A0A1W2PPV4 95 aa17.09■□□□□ 0.33
CPNE1-223ENST00000475146 LYRM9A8MSI8 78 aa17.09■□□□□ 0.33
CPNE1-223ENST00000475146 RAB2AP61019 212 aa17.09■□□□□ 0.33
CPNE1-223ENST00000475146 INO80EQ8NBZ0 244 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-223ENST00000475146 LINC00477Q96M19 166 aa17.09■□□□□ 0.33
CPNE1-223ENST00000475146 HYDINQ4G0P3 5121 aa17.08■□□□□ 0.32
CPNE1-223ENST00000475146 TRAV12-3A0A0B4J271 114 aa17.08■□□□□ 0.32
CPNE1-223ENST00000475146 RANP62826 216 aaKnown RBP17.08■□□□□ 0.32
CPNE1-223ENST00000475146 OR2T35Q8NGX2 323 aa17.08■□□□□ 0.32
CPNE1-223ENST00000475146 NDUFAF3Q9BU61 184 aa17.08■□□□□ 0.32
CPNE1-223ENST00000475146 AGPAT4-IT1Q9H0P7 198 aa17.08■□□□□ 0.32
CPNE1-223ENST00000475146 PLAC8L1A1L4L8 177 aa17.07■□□□□ 0.32
CPNE1-223ENST00000475146 TMEM78Q5T7P6 136 aa17.07■□□□□ 0.32
CPNE1-223ENST00000475146 Q9H3A6 140 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms