RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 PIK3C2AO00443 1686 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 RIMS1Q86UR5 1692 aaKnown RBP0.46□□□□□ -2.34
HDAC9-222ENST00000474742 PTPRTO14522 1441 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 PLCH2O75038 1416 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 FAM135BQ49AJ0 1406 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 CD109Q6YHK3 1445 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 FGD6Q6ZV73 1430 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 CNTLNQ9NXG0 1405 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 YEATS2Q9ULM3 1422 aa0.46□□□□□ -2.34
HDAC9-222ENST00000474742 LTBP2Q14767 1821 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 KIAA1671Q9BY89 1806 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SPEF2Q9C093 1822 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 FANCMQ8IYD8 2048 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SCN3AQ9NY46 2000 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SPAG17Q6Q759 2223 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 OTOFQ9HC10 1997 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MAPKBP1O60336 1514 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ARAP3Q8WWN8 1544 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TOPBP1Q92547 1522 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 DLC1Q96QB1 1528 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MYH3P11055 1940 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MYH7P12883 1935 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MYH2Q9UKX2 1941 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV12-2A0A075B6T6 113 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 UQCRHLA0A096LP55 91 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV3D-11A0A0A0MRZ8 115 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGLV3-32A0A0A0MS00 114 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV2A0A0B4J234 112 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV10A0A0B4J240 114 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV3A0A0B4J244 114 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV1-1A0A0B4J248 108 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGHV1-18A0A0C4DH31 117 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MUC21A0A0G2JKD1 596 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 A0A1B0GW64 132 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 KANTRA0A1W2PQU2 76 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 A0A1W2PRS3 328 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TMEM30CPA0ZSE6 113 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 NAP1L6A6NFF2 107 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 LINC00587B1AMM8 73 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MCRIP1C9JLW8 97 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 E7EQL1 145 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF670-ZNF695F2Z2N8 137 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 BUB1B-PAK6H3BSN5 160 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CCDC179H3BU77 68 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 K7ERJ3 54 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 M0R2P5 195 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 M0R378 163 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 LECT2O14960 151 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SSSCA1O60232 199 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CPSF4O95639 269 aaKnown RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 OXTP01178 125 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 LHBP01229 141 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV1-5P01602 117 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGLV6-57P01721 117 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 GYPAP02724 150 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TCRAP04437 139 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV4-1P06312 121 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CTSGP08311 255 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SPINK8P0C7L1 97 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IGLC6P0CF74 106 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAPPC2P0DI81 140 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TRAPPC2BP0DI82 140 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 P0DMU3 169 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 FAM231AP0DMU4 169 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 FAM231CP0DMU5 169 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CXCL8P10145 99 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 IL7P13232 177 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CYBAP13498 195 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF14P17017 642 aaPredicted RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 FKBP2P26885 142 aaKnown RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 S100A3P33764 101 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF80P51504 273 aaPredicted RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CMC4P56277 68 aaPredicted RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 EDDM3BP56851 147 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 KRTAP12-4P60329 112 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 GNG11P61952 73 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 UBE2G1P62253 170 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 UBA52P62987 128 aaKnown RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SUPT4H1P63272 117 aaKnown RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 DCDP81605 110 aaKnown RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 QRFPP83859 136 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 HSD52Q0P140 79 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF816Q0VGE8 651 aaPredicted RBP0.45□□□□□ -2.34
HDAC9-222ENST00000474742 SS18Q15532 418 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MPV17LQ2QL34 196 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 LINC00303Q3SY05 128 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ASB16-AS1Q495Z4 193 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 FAM74A4Q5TZK3 123 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 FAM27BQ5VT28 67 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 MIC13Q5XKP0 118 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ALKAL1Q6UXT8 129 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 TMEM91Q6ZNR0 172 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CYP2G1PQ6ZSU1 146 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 Q6ZUT4 128 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF720Q7Z2F6 126 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ARPINQ7Z6K5 226 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 CLECL1Q8IZS7 167 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 EXOC3-AS1Q8N2X6 119 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 LINC00337Q8N6G1 96 aa0.45□□□□□ -2.34
HDAC9-222ENST00000474742 ZFAND2AQ8N6M9 145 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms