RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
COL1A1-204ENST00000474644 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
COL1A1-204ENST00000474644 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 M0R3E3 92 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-204ENST00000474644 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-204ENST00000474644 CNN1P51911 297 aaKnown RBP11.54□□□□□ -0.56
COL1A1-204ENST00000474644 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-204ENST00000474644 SLC51BQ86UW2 128 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 OR8A1Q8NGG7 326 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 CLUHP3Q96NS8 147 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 AAMDCQ9H7C9 122 aa11.54□□□□□ -0.56
COL1A1-204ENST00000474644 A8MTW9 85 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 UMAD1C9J7I0 102 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 GIG44P09565 113 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-204ENST00000474644 HIST1H1AQ02539 215 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-204ENST00000474644 ICAM4Q14773 271 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 Q6ZWC4 215 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
COL1A1-204ENST00000474644 COL7A1Q02388 2944 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 TENM3Q9P273 2699 aa11.53□□□□□ -0.56
COL1A1-204ENST00000474644 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
COL1A1-204ENST00000474644 CXorf1O96002 111 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 GCHFRP30047 84 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 FHITP49789 147 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 RANP62826 216 aaKnown RBP11.52□□□□□ -0.57
COL1A1-204ENST00000474644 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 RCHY1Q96PM5 261 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 Q9H3A6 140 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 PRELID1Q9Y255 219 aa11.52□□□□□ -0.57
COL1A1-204ENST00000474644 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 NUTF2P61970 127 aaKnown RBP11.51□□□□□ -0.57
COL1A1-204ENST00000474644 AMTNQ6UX39 209 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 FAM213BQ8TBF2 198 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 SUN5Q8TC36 379 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 RNF183Q96D59 192 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 OVOL2Q9BRP0 275 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 TP53TG1Q9Y2A0 90 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 U3KQK5 164 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 AGRNO00468 2067 aa11.51□□□□□ -0.57
COL1A1-204ENST00000474644 STAB2Q8WWQ8 2551 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-204ENST00000474644 FXYD7P58549 80 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 EIF5AL1Q6IS14 154 aaKnown RBP11.5□□□□□ -0.57
COL1A1-204ENST00000474644 DPPA3Q6W0C5 159 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 IQCF2Q8IXL9 164 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 OR10J6PQ8NGY7 276 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 OTORQ9NRC9 128 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
COL1A1-204ENST00000474644 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
COL1A1-204ENST00000474644 SPRY2O43597 315 aa11.49□□□□□ -0.57
COL1A1-204ENST00000474644 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
COL1A1-204ENST00000474644 TMPRSS5Q9H3S3 457 aa11.49□□□□□ -0.57
COL1A1-204ENST00000474644 XCL2Q9UBD3 114 aa11.49□□□□□ -0.57
COL1A1-204ENST00000474644 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
COL1A1-204ENST00000474644 BOLA2-SMG1P6H3BVE0 249 aa11.48□□□□□ -0.57
COL1A1-204ENST00000474644 CSNK1G2-AS1Q8NCQ2 148 aa11.48□□□□□ -0.57
COL1A1-204ENST00000474644 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
COL1A1-204ENST00000474644 IGKV2-40A0A087WW87 121 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-204ENST00000474644 M0R2Z0 102 aa11.47□□□□□ -0.57
COL1A1-204ENST00000474644 IGKV2D-40P01614 121 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-204ENST00000474644 SPINK13Q1W4C9 94 aa11.47□□□□□ -0.57
COL1A1-204ENST00000474644 FAM74A1Q5RGS3 127 aa11.47□□□□□ -0.57
COL1A1-204ENST00000474644 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
COL1A1-204ENST00000474644 PGPA6NDG6 321 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 GGTLC3B5MD39 225 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 CSN1S1P47710 185 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 SULT1A2P50226 295 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 RAB5CP51148 216 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 ERCC8Q13216 396 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 CMTM2Q8TAZ6 248 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 RXFP4Q8TDU9 374 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.57
COL1A1-204ENST00000474644 A0A1B0GV50 99 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 A0A1W2PRE2 83 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 CRXO43186 299 aaPredicted RBP11.45□□□□□ -0.58
COL1A1-204ENST00000474644 AMBPP02760 352 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 H2AFB1P0C5Y9 115 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 CT45A10P0DMU9 189 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 ODF3Q96PU9 254 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 VGLL1Q99990 258 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 RPH3ALQ9UNE2 315 aa11.45□□□□□ -0.58
COL1A1-204ENST00000474644 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
COL1A1-204ENST00000474644 RBAKDNA6NC62 111 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 DIRC3C9JPN6 131 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 SLC25A5P05141 298 aaKnown RBP11.44□□□□□ -0.58
COL1A1-204ENST00000474644 UBE2G2P60604 165 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 GNG5P63218 68 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 ALKAL2Q6UX46 152 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 C9orf47Q6ZRZ4 202 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 IGF2BP2-AS1Q96M15 143 aa11.44□□□□□ -0.58
COL1A1-204ENST00000474644 RARRES2Q99969 163 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms