RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 C10orf142B7Z368 130 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 H3BVH4 76 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 IGF1P05019 195 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 FABP2P12104 132 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 LINC00518Q8N0U6 118 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 RNF183Q96D59 192 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 C20orf78Q9BR46 151 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 CST9LQ9H4G1 147 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 UQCR10Q9UDW1 63 aa3.66□□□□□ -1.82
CCNL1-215ENST00000474539 DOCK8Q8NF50 2099 aa3.65□□□□□ -1.82
CCNL1-215ENST00000474539 H3BMM0 161 aa3.65□□□□□ -1.82
CCNL1-215ENST00000474539 APOHP02749 345 aaPredicted RBP3.65□□□□□ -1.82
CCNL1-215ENST00000474539 CXCL3P19876 107 aa3.65□□□□□ -1.82
CCNL1-215ENST00000474539 LINC01545Q5VT33 79 aa3.65□□□□□ -1.82
CCNL1-215ENST00000474539 BCL6BQ8N143 479 aaPredicted RBP3.65□□□□□ -1.82
CCNL1-215ENST00000474539 SCRT1Q9BWW7 348 aa3.65□□□□□ -1.82
CCNL1-215ENST00000474539 KLF12Q9Y4X4 402 aa3.65□□□□□ -1.82
CCNL1-215ENST00000474539 NUPR2A6NF83 97 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 PRSS46E5RG02 174 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV1-5P01602 117 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 LYL1P12980 280 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 PLP1P60201 277 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 HERVK_113P63121 156 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 LINC00469Q8N7U9 141 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 CITED1Q99966 193 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 S4R3C0 116 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 FAM186AA6NE01 2351 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 RP1L1Q8IWN7 2480 aaPredicted RBP3.65□□□□□ -1.83
CCNL1-215ENST00000474539 TRAV10A0A0B4J240 114 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 TRAV3A0A0B4J244 114 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 GRIFINA4D1Z8 144 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 LINC00473A8K010 186 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 HIGD1CA8MV81 97 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 LEPROTO15243 131 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 SH2D1AO60880 128 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 SRP19P09132 144 aaKnown RBP3.65□□□□□ -1.83
CCNL1-215ENST00000474539 LMO4P61968 165 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 FAM231DQ6ZW35 169 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 Q86TA4 180 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 MYLKQ15746 1914 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 CACNA1BQ00975 2339 aa3.65□□□□□ -1.83
CCNL1-215ENST00000474539 TRBV10-1A0A0K0K1A3 114 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 SCO2A0A1W2PP80 73 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 PGPEP1LA6NFU8 196 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 LY6G6DO95868 133 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 CBLN1P23435 193 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 C11orf71Q6IPW1 123 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 ZFP2Q6ZN57 461 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 GLMPQ8WWB7 406 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 MGST2Q99735 147 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 XCL2Q9UBD3 114 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 CARHSP1Q9Y2V2 147 aaKnown RBP3.64□□□□□ -1.83
CCNL1-215ENST00000474539 SCN8AQ9UQD0 1980 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 CACNA1IQ9P0X4 2223 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 LY6HO94772 140 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 PAX9P55771 341 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 LINC00158P58513 81 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 DNLZQ5SXM8 178 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 ZNF491Q8N8L2 437 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 CFHR4Q92496 578 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 NIT2Q9NQR4 276 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 SPANXA1Q9NS26 97 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 CTSZQ9UBR2 303 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 APC2O95996 2303 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 IGLV11-55A0A075B6I3 123 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 A0A087X0K7 114 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 CGB7P0DN87 165 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 KLF5Q13887 457 aaPredicted RBP3.64□□□□□ -1.83
CCNL1-215ENST00000474539 EBI3Q14213 229 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 SEM1Q6ZVN7 128 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 RNF144BQ7Z419 303 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 PSMG3-AS1Q96PY0 264 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 MRPL36Q9P0J6 103 aaKnown RBP3.64□□□□□ -1.83
CCNL1-215ENST00000474539 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 C2orf70A6NJV1 201 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 H7C423 109 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 IGLV1-47P01700 117 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 IGLC1P0CG04 106 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 HERV-K104P63124 156 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 C10orf55Q5SWW7 151 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 ODF3L1Q8IXM7 274 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 MTURNQ8N3F0 131 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 Q8N9W7 124 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 C16orf95Q9H693 158 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 PGPEP1Q9NXJ5 209 aa3.64□□□□□ -1.83
CCNL1-215ENST00000474539 IGHV3-48P01763 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 MAPK1IP1LQ8NDC0 245 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 OR10D4PQ8NGN7 298 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 C11orf45Q8TAV5 145 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 ARHGEF17Q96PE2 2063 aaPredicted RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 CENPFP49454 3210 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 A0A1W2PNU3 283 aaPredicted RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 TSPAN13O95857 204 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 ZNF25P17030 456 aaPredicted RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 TECTAO75443 2155 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 TRAV8-3A0A0A6YYJ7 113 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE12BA1L429 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 G3V318 75 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms