RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, human

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-204	ENST00000474413	DNAH10	Q8IVF4	4471 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	PLAC8L1	A1L4L8	177 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	SMIM9	A6NGZ8	99 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	EIF3G	O75821	320 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	INS	P01308	110 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	HIST1H1E	P10412	219 aa	Known RBP	12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	RGS21	Q2M5E4	152 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	FXYD5	Q96DB9	178 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	GOLT1B	Q9Y3E0	138 aa		12.84	□□□□□ -0.35
EFNA1-204	ENST00000474413	LOC102723971	A0A1B0GUV8	181 aa		12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	NPIPB6	E9PJ23	425 aa		12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	AMBP	P02760	352 aa		12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	GIP	P09681	153 aa	Predicted RBP	12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	KCNIP2	Q9NS61	270 aa		12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	FUT9	Q9Y231	359 aa		12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	KLK5	Q9Y337	293 aa	Predicted RBP	12.83	□□□□□ -0.36
EFNA1-204	ENST00000474413	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	EMP1	P54849	157 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	RHOB	P62745	196 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	PDE6H	Q13956	83 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	FFAR4	Q5NUL3	377 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	EXOC3-AS1	Q8N2X6	119 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	PHYHIPL	Q96FC7	376 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	AQP10	Q96PS8	301 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	MRPL32	Q9BYC8	188 aa	Known RBP	12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	DKK2	Q9UBU2	259 aa		12.82	□□□□□ -0.36
EFNA1-204	ENST00000474413	RNF222	A6NCQ9	220 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	OR10J4	P0C629	311 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	CT45A10	P0DMU9	189 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	AZU1	P20160	251 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	FAM222A	Q5U5X8	452 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	RPP25L	Q8N5L8	163 aa	Known RBP	12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	BLNK	Q8WV28	456 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	MRPL53	Q96EL3	112 aa	Known RBP	12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	PLA2G2E	Q9NZK7	142 aa		12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.81	□□□□□ -0.36
EFNA1-204	ENST00000474413	FRAS1	Q86XX4	4008 aa		12.8	□□□□□ -0.36
EFNA1-204	ENST00000474413	C17orf112	F2Z3M2	114 aa		12.8	□□□□□ -0.36
EFNA1-204	ENST00000474413	HBE1	P02100	147 aa		12.8	□□□□□ -0.36
EFNA1-204	ENST00000474413	GFI1B	Q5VTD9	330 aa		12.8	□□□□□ -0.36
EFNA1-204	ENST00000474413	APLN	Q9ULZ1	77 aa		12.8	□□□□□ -0.36
EFNA1-204	ENST00000474413	TRAV10	A0A0B4J240	114 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	TMEM189	A5PLL7	270 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	C11orf94	C9JXX5	98 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	IFNA5	P01569	189 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	CDKN1B	P46527	198 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	RAB2A	P61019	212 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	ERCC8	Q13216	396 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	RRN3P1	Q2M238	152 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	OR10J6P	Q8NGY7	276 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	C2CD4C	Q8TF44	421 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	FAM19A4	Q96LR4	140 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	PAXX	Q9BUH6	204 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	OR51M1	Q9H341	326 aa		12.79	□□□□□ -0.36
EFNA1-204	ENST00000474413	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	LY6G6C	O95867	125 aa		12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	IGKV2D-40	P01614	121 aa	Predicted RBP	12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	NBEAP1	P0C6P0	100 aa		12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	RNF141	Q8WVD5	230 aa		12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	ODF3	Q96PU9	254 aa		12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	BIRC6	Q9NR09	4857 aa		12.78	□□□□□ -0.36
EFNA1-204	ENST00000474413	SPART-AS1	P0CW21	52 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	TSPO	P30536	169 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	ICAM4	Q14773	271 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	SCGB1C1	Q8TD33	95 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	ASB13	Q8WXK3	278 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	TMEM208	Q9BTX3	173 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	TNFSF18	Q9UNG2	199 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	TIMM9	Q9Y5J7	89 aa		12.77	□□□□□ -0.37
EFNA1-204	ENST00000474413	DNAH2	Q9P225	4427 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	DEFB131B	A0A096LNP1	70 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	IGLL5	B9A064	214 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	OR7C2	O60412	319 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	UBE2L3	P68036	154 aa	Known RBP	12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	FAM122C	Q6P4D5	195 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	AGPAT4-IT1	Q9H0P7	198 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	SH3BGRL3	Q9H299	93 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	PRELID1	Q9Y255	219 aa		12.76	□□□□□ -0.37
EFNA1-204	ENST00000474413	IGHV4-4	A0A075B6R2	117 aa		12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	PRR9	Q5T870	116 aa		12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	HSD17B11	Q8NBQ5	300 aa		12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	OR2T35	Q8NGX2	323 aa		12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	OR2G3	Q8NGZ4	309 aa		12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	RNASE8	Q8TDE3	154 aa	Known RBP	12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	VGLL1	Q99990	258 aa		12.75	□□□□□ -0.37
EFNA1-204	ENST00000474413	FXYD6-FXYD2	A0A087WZ82	144 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	KLLN	B2CW77	178 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413		J3KRW8	73 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	M6PR	P20645	277 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	ATP6V0C	P27449	155 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	TAS2R60	P59551	318 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	KHDC3L	Q587J8	217 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	LGALS9C	Q6DKI2	356 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	TMEM256	Q8N2U0	113 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	NIPSNAP3B	Q9BS92	247 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	PPP1R14D	Q9NXH3	145 aa		12.74	□□□□□ -0.37
EFNA1-204	ENST00000474413	SMLR1	H3BR10	107 aa		12.73	□□□□□ -0.37
EFNA1-204	ENST00000474413	RPL7L1	Q6DKI1	246 aa	Known RBP	12.73	□□□□□ -0.37
EFNA1-204	ENST00000474413		Q6ZQT7	251 aa		12.73	□□□□□ -0.37
EFNA1-204	ENST00000474413	C9orf47	Q6ZRZ4	202 aa		12.73	□□□□□ -0.37

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