RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TMED6Q8WW62 240 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 ZNF586Q9NXT0 402 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 TRBV19A0A075B6N1 114 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 CTXND1A0A1B0GTU2 59 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 HMGB3O15347 200 aaKnown RBP13.58□□□□□ -0.24
CCDC171-206ENST00000474193 CXorf1O96002 111 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 MIFP14174 115 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 DPPA3Q6W0C5 159 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 C17orf77Q96MU5 243 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 AAMDCQ9H7C9 122 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 AGRNO00468 2067 aa13.58□□□□□ -0.24
CCDC171-206ENST00000474193 ZNF253O75346 499 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 STAG3L2P0CL84 134 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 STAG3L3P0CL85 134 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 RAB5CP51148 216 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 IQCF2Q8IXL9 164 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 ZNF738Q8NE65 137 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
CCDC171-206ENST00000474193 FXYD5Q96DB9 178 aa13.57□□□□□ -0.24
CCDC171-206ENST00000474193 ZNF331Q9NQX6 463 aaPredicted RBP13.57□□□□□ -0.24
CCDC171-206ENST00000474193 H3BMM0 161 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 EIF3GO75821 320 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC171-206ENST00000474193 ARL14EPLP0DKL9 152 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 HLA-DRB4P13762 266 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 PSG3Q16557 428 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 SAT2Q96F10 170 aaPredicted RBP13.56□□□□□ -0.24
CCDC171-206ENST00000474193 HLA-DRB4X5D2U9 266 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 CSMD3Q7Z407 3707 aa13.56□□□□□ -0.24
CCDC171-206ENST00000474193 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
CCDC171-206ENST00000474193 TRAV8-2A0A0B4J237 113 aa13.55□□□□□ -0.24
CCDC171-206ENST00000474193 FOXI2Q6ZQN5 318 aa13.55□□□□□ -0.24
CCDC171-206ENST00000474193 TMEM167BQ9NRX6 74 aa13.55□□□□□ -0.24
CCDC171-206ENST00000474193 RYR3Q15413 4870 aa13.55□□□□□ -0.24
CCDC171-206ENST00000474193 MAP1LC3B2A6NCE7 125 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 SLC17A3O00476 420 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 DEFB4AO15263 64 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 GCHFRP30047 84 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 RANP62826 216 aaKnown RBP13.54□□□□□ -0.24
CCDC171-206ENST00000474193 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 LYPD1Q8N2G4 141 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 OR4B1Q8NGF8 309 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 ZNF503Q96F45 646 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 C20orf173Q96LM9 149 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 MAP1LC3BQ9GZQ8 125 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
CCDC171-206ENST00000474193 XCL2Q9UBD3 114 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 PRELID1Q9Y255 219 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 BOLA1Q9Y3E2 137 aa13.54□□□□□ -0.24
CCDC171-206ENST00000474193 ZNF705EA8MWA4 302 aaPredicted RBP13.53□□□□□ -0.24
CCDC171-206ENST00000474193 BOLA2-SMG1P6H3BVE0 249 aa13.53□□□□□ -0.24
CCDC171-206ENST00000474193 LY6G6CO95867 125 aa13.53□□□□□ -0.24
CCDC171-206ENST00000474193 GIG44P09565 113 aaPredicted RBP13.53□□□□□ -0.24
CCDC171-206ENST00000474193 NANOS2P60321 138 aaKnown RBP13.53□□□□□ -0.24
CCDC171-206ENST00000474193 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
CCDC171-206ENST00000474193 SFT2D1Q8WV19 159 aa13.53□□□□□ -0.24
CCDC171-206ENST00000474193 RPUSD4Q96CM3 377 aaKnown RBP13.53□□□□□ -0.24
CCDC171-206ENST00000474193 IGHV4-28A0A0C4DH34 117 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 C11orf94C9JXX5 98 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 TEX46H3BTG2 121 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.25
CCDC171-206ENST00000474193 NDUFB4O95168 129 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 IGKV3-20P01619 116 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 H2AFB1P0C5Y9 115 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 CSN1S1P47710 185 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 FHITP49789 147 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 ICAM4Q14773 271 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 SSX7Q7RTT5 188 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 STARD9Q9P2P6 4700 aa13.52□□□□□ -0.25
CCDC171-206ENST00000474193 HLA-DMBP28068 263 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 SULT1A2P50226 295 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 FGF8P55075 233 aaPredicted RBP13.51□□□□□ -0.25
CCDC171-206ENST00000474193 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 Q8NAQ8 132 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 CSNK1G2-AS1Q8NCQ2 148 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 MRPL53Q96EL3 112 aaKnown RBP13.51□□□□□ -0.25
CCDC171-206ENST00000474193 CLUHP3Q96NS8 147 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 Q9H3A6 140 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 PLA2G2EQ9NZK7 142 aa13.51□□□□□ -0.25
CCDC171-206ENST00000474193 OR10J6PQ8NGY7 276 aa13.5□□□□□ -0.25
CCDC171-206ENST00000474193 CMTM2Q8TAZ6 248 aa13.5□□□□□ -0.25
CCDC171-206ENST00000474193 C2CD4CQ8TF44 421 aa13.5□□□□□ -0.25
CCDC171-206ENST00000474193 LINC00476Q8WZB0 136 aa13.5□□□□□ -0.25
CCDC171-206ENST00000474193 OTORQ9NRC9 128 aa13.5□□□□□ -0.25
CCDC171-206ENST00000474193 PPP1R14DQ9NXH3 145 aa13.5□□□□□ -0.25
CCDC171-206ENST00000474193 A0A0J9YX75 114 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 ZNF705FA8MVS1 300 aaPredicted RBP13.49□□□□□ -0.25
CCDC171-206ENST00000474193 F6UB75 175 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 TCTAP57738 103 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 HIST1H1AQ02539 215 aaPredicted RBP13.49□□□□□ -0.25
CCDC171-206ENST00000474193 ALKAL2Q6UX46 152 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 OR8A1Q8NGG7 326 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 RXFP4Q8TDU9 374 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 MBD3L1Q8WWY6 194 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 X6R8D5 127 aa13.49□□□□□ -0.25
CCDC171-206ENST00000474193 PGPA6NDG6 321 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms