RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 SH3BGRL3Q9H299 93 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 LYRM2Q9NU23 88 aaPredicted RBP0.72□□□□□ -2.29
GINS1-202ENST00000473460 MED29Q9NX70 200 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 PRNDQ9UKY0 176 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 U3KQ87 197 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 MAP3K1Q13233 1512 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 ERICH3Q5RHP9 1530 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 PPLO60437 1756 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 ZFHX2Q9C0A1 2572 aaPredicted RBP0.72□□□□□ -2.29
GINS1-202ENST00000473460 ABCC10Q5T3U5 1492 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 SPHKAPQ2M3C7 1700 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 OVOS2A0A0G2JMS6 1433 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 ARHGAP31Q2M1Z3 1444 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 MYH8P13535 1937 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 MYH13Q9UKX3 1938 aa0.72□□□□□ -2.29
GINS1-202ENST00000473460 RIMBP3CA6NJZ7 1639 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 RIMBP3BA6NNM3 1639 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 CPAMD8Q8IZJ3 1885 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 RIMBP3Q9UFD9 1639 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 PSME4Q14997 1843 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 STRCQ7RTU9 1775 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 RGPD4Q7Z3J3 1758 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 DOCK4Q8N1I0 1966 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 ARL5CA6NH57 179 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 FAM25AB3EWG3 89 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 FAM25CB3EWG5 89 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 FAM25GB3EWG6 89 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 ZNF736B4DX44 427 aaPredicted RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 E7EQ34 232 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 J3KT08 172 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 GADD45GO95257 159 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 HLA-EP13747 358 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 RPL7P18124 248 aaKnown RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 KDELR1P24390 212 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 POLR2HP52434 150 aaKnown RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 MAXP61244 160 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 RRAS2P62070 204 aaPredicted RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 GNG5P63218 68 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 EMX2Q04743 252 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 MORN2Q502X0 79 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 Q5XG85 94 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 SCIMPQ6UWF3 145 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 EXOC3-AS1Q8N2X6 119 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 TMEM203Q969S6 136 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 PLEKHB2Q96CS7 222 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 LYSMD1Q96S90 227 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 TCEAL7Q9BRU2 100 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 SPANXA1Q9NS26 97 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 COPZ2Q9P299 210 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 LAMTOR3Q9UHA4 124 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 ERG28Q9UKR5 140 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 ADGRL2O95490 1459 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 PZPP20742 1482 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 MYOM2P54296 1465 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 MAGI1Q96QZ7 1491 aaPredicted RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 MYH1P12882 1939 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 TCHHQ07283 1943 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 ALPK3Q96L96 1907 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 TET3O43151 1660 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 PPRC1Q5VV67 1664 aaKnown RBP0.71□□□□□ -2.3
GINS1-202ENST00000473460 USP54Q70EL1 1684 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 ROBO1Q9Y6N7 1651 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 SBF2Q86WG5 1849 aa0.71□□□□□ -2.3
GINS1-202ENST00000473460 PRRC2BQ5JSZ5 2229 aaKnown RBP0.7□□□□□ -2.3
GINS1-202ENST00000473460 SDK1Q7Z5N4 2213 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 TMEM2Q9UHN6 1383 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 ADAMTS12P58397 1594 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 RGPD3A6NKT7 1758 aaPredicted RBP0.7□□□□□ -2.3
GINS1-202ENST00000473460 EML6Q6ZMW3 1958 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 NISCHQ9Y2I1 1504 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 MON2Q7Z3U7 1717 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 ARHGEF28Q8N1W1 1705 aaKnown RBP0.7□□□□□ -2.3
GINS1-202ENST00000473460 ARAP2Q8WZ64 1704 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.7□□□□□ -2.3
GINS1-202ENST00000473460 MYLKQ15746 1914 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 GREB1Q4ZG55 1949 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 ANAPC1Q9H1A4 1944 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 ZC3H13Q5T200 1668 aaKnown RBP0.7□□□□□ -2.3
GINS1-202ENST00000473460 A2ML1A8K2U0 1454 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 ARHGAP35Q9NRY4 1499 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 IGLV3-32A0A0A0MS00 114 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 BORCS7-ASMTA0A0B4J1R7 106 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 TRAV3A0A0B4J244 114 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 TRAV5A0A0B4J249 113 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 RIIAD1A6NNX1 92 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 H7BYZ3 331 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 DEGS1O15121 323 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 TPST1O60507 370 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 PFDN1O60925 122 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 BANF1O75531 89 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 PIAS1O75925 651 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 TNFSF15O95150 251 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 IFNA4P05014 189 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 S100A8P05109 93 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 MPC1LP0DKB6 136 aa0.7□□□□□ -2.3
GINS1-202ENST00000473460 ZNF25P17030 456 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 290.4 ms