RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 GSKIPQ9P0R6 139 aa9.44□□□□□ -0.9
CHD3-209ENST00000473376 DNAH11Q96DT5 4516 aa9.44□□□□□ -0.9
CHD3-209ENST00000473376 NPIPB6E9PJ23 425 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 L7N2F9 121 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 SCGB1D2O95969 90 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 RLN2P04090 185 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 HTN1P15515 57 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 LEPP41159 167 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
CHD3-209ENST00000473376 VAMP2P63027 116 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 TNP2Q05952 138 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 PDE6HQ13956 83 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 SSX7Q7RTT5 188 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 ZNF575Q86XF7 245 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 GNPNAT1Q96EK6 184 aaPredicted RBP9.43□□□□□ -0.9
CHD3-209ENST00000473376 Q9H3A6 140 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 Q9H8V8 135 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 PRELID1Q9Y255 219 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 WDR83OSQ9Y284 106 aa9.43□□□□□ -0.9
CHD3-209ENST00000473376 C16orf90A8MZG2 172 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
CHD3-209ENST00000473376 NMBP08949 121 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 IL7P13232 177 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
CHD3-209ENST00000473376 S100A11P31949 105 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 OPCMLQ14982 345 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 GFI1BQ5VTD9 330 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 C20orf85Q9H1P6 137 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 TMEM14CQ9P0S9 112 aa9.42□□□□□ -0.9
CHD3-209ENST00000473376 H3BQ15 152 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 MPDU1O75352 247 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 ATP6V1FQ16864 119 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 NRARPQ7Z6K4 114 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 ZNF680Q8NEM1 530 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 ZNF431Q8TF32 576 aaPredicted RBP9.41□□□□□ -0.9
CHD3-209ENST00000473376 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 C11orf1Q9H5F2 150 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 UQCC1Q9NVA1 299 aa9.41□□□□□ -0.9
CHD3-209ENST00000473376 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 SLC17A3O00476 420 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 SULT1A1P50225 295 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 HBG1P69891 147 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 HBG2P69892 147 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 OR5I1Q13606 314 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 ANXA2RQ3ZCQ2 193 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 MORN5Q5VZ52 161 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 C2orf50Q96LR7 162 aa9.4□□□□□ -0.9
CHD3-209ENST00000473376 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
CHD3-209ENST00000473376 MRPS16Q9Y3D3 137 aaKnown RBP9.4□□□□□ -0.9
CHD3-209ENST00000473376 TRBV19A0A075B6N1 114 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 KLLNB2CW77 178 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 PLA2G10O15496 165 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 LYRM1O43325 122 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 TCRBP04435 133 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 HIST1H1EP10412 219 aaKnown RBP9.39□□□□□ -0.91
CHD3-209ENST00000473376 CAV2P51636 162 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 IL15RAQ13261 267 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 FAM19A4Q96LR4 140 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 SLC39A9Q9NUM3 307 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
CHD3-209ENST00000473376 DYNC1H1Q14204 4646 aaKnown RBP9.39□□□□□ -0.91
CHD3-209ENST00000473376 CRISP2P16562 243 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 HOXA5P20719 270 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 BCAP31P51572 246 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 KIR3DS1Q14943 382 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 IBA57Q5T440 356 aaKnown RBP9.38□□□□□ -0.91
CHD3-209ENST00000473376 MIC13Q5XKP0 118 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 LINC00299Q6ZSB3 139 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 STX12Q86Y82 276 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 NDUFA13Q9P0J0 144 aa9.38□□□□□ -0.91
CHD3-209ENST00000473376 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 LINC00854A0A1B0GVQ3 168 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 C5orf51A6NDU8 294 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
CHD3-209ENST00000473376 GAGE7O76087 117 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 CST7O76096 145 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 SLAQ13239 276 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 ESRGQ1W209 222 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 TMEM252Q8N6L7 170 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
CHD3-209ENST00000473376 LSM5Q9Y4Y9 91 aaKnown RBP9.37□□□□□ -0.91
CHD3-209ENST00000473376 C7orf71A4D174 169 aa9.36□□□□□ -0.91
CHD3-209ENST00000473376 K7EP13 123 aa9.36□□□□□ -0.91
CHD3-209ENST00000473376 EIF4E3Q8N5X7 224 aaKnown RBP9.36□□□□□ -0.91
CHD3-209ENST00000473376 CCDC32Q9BV29 185 aa9.36□□□□□ -0.91
CHD3-209ENST00000473376 NUDT15Q9NV35 164 aa9.36□□□□□ -0.91
CHD3-209ENST00000473376 RYR1P21817 5038 aa9.36□□□□□ -0.91
CHD3-209ENST00000473376 TRAV5A0A0B4J249 113 aa9.35□□□□□ -0.91
CHD3-209ENST00000473376 FAM24AA6NFZ4 105 aa9.35□□□□□ -0.91
CHD3-209ENST00000473376 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
CHD3-209ENST00000473376 SPINK4O60575 86 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms