RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CNN1P51911 297 aaKnown RBP15.2■□□□□ 0.02
TOP3A-204ENST00000472959 LGALSLQ3ZCW2 172 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-204ENST00000472959 AKR1C8PQ5T2L2 129 aa15.2■□□□□ 0.02
TOP3A-204ENST00000472959 LYPD1Q8N2G4 141 aa15.2■□□□□ 0.02
TOP3A-204ENST00000472959 HUWE1Q7Z6Z7 4374 aaKnown RBP15.19■□□□□ 0.02
TOP3A-204ENST00000472959 STAG3L2P0CL84 134 aa15.19■□□□□ 0.02
TOP3A-204ENST00000472959 STAG3L3P0CL85 134 aa15.19■□□□□ 0.02
TOP3A-204ENST00000472959 NBEAL2Q6ZNJ1 2754 aa15.19■□□□□ 0.02
TOP3A-204ENST00000472959 AGRNO00468 2067 aa15.18■□□□□ 0.02
TOP3A-204ENST00000472959 ZNF705FA8MVS1 300 aaPredicted RBP15.18■□□□□ 0.02
TOP3A-204ENST00000472959 EIF3GO75821 320 aaKnown RBP eCLIP15.18■□□□□ 0.02
TOP3A-204ENST00000472959 SEC11BP0C7V7 166 aa15.18■□□□□ 0.02
TOP3A-204ENST00000472959 HIST1H1AQ02539 215 aaPredicted RBP15.18■□□□□ 0.02
TOP3A-204ENST00000472959 OR10J6PQ8NGY7 276 aa15.18■□□□□ 0.02
TOP3A-204ENST00000472959 HMGB3O15347 200 aaKnown RBP15.17■□□□□ 0.02
TOP3A-204ENST00000472959 ZNF705DP0CH99 300 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-204ENST00000472959 ZNF705BP0CI00 300 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-204ENST00000472959 ARL14EPLP0DKL9 152 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 TPT1P13693 172 aaKnown RBP15.17■□□□□ 0.02
TOP3A-204ENST00000472959 CD300CQ08708 224 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 ICAM4Q14773 271 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 ZFP69Q49AA0 526 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 AMTNQ6UX39 209 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 BAP18Q8IXM2 172 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 EXOC3-AS1Q8N2X6 119 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 STOML3Q8TAV4 291 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 PHYHIPLQ96FC7 376 aa15.17■□□□□ 0.02
TOP3A-204ENST00000472959 CTXND1A0A1B0GTU2 59 aa15.16■□□□□ 0.02
TOP3A-204ENST00000472959 UMAD1C9J7I0 102 aa15.16■□□□□ 0.02
TOP3A-204ENST00000472959 CXorf1O96002 111 aa15.16■□□□□ 0.02
TOP3A-204ENST00000472959 RANP62826 216 aaKnown RBP15.16■□□□□ 0.02
TOP3A-204ENST00000472959 CSNK1G2-AS1Q8NCQ2 148 aa15.16■□□□□ 0.02
TOP3A-204ENST00000472959 WWC2-AS2Q96NR7 200 aa15.16■□□□□ 0.02
TOP3A-204ENST00000472959 XCL2Q9UBD3 114 aa15.16■□□□□ 0.02
TOP3A-204ENST00000472959 PRAC2D3DTV9 90 aa15.15■□□□□ 0.02
TOP3A-204ENST00000472959 M0R3E3 92 aa15.15■□□□□ 0.02
TOP3A-204ENST00000472959 AMBPP02760 352 aa15.15■□□□□ 0.02
TOP3A-204ENST00000472959 RARRES2Q99969 163 aa15.15■□□□□ 0.02
TOP3A-204ENST00000472959 SLC35B3Q9H1N7 401 aa15.15■□□□□ 0.02
TOP3A-204ENST00000472959 PPP1R14DQ9NXH3 145 aa15.15■□□□□ 0.02
TOP3A-204ENST00000472959 STAB2Q8WWQ8 2551 aa15.14■□□□□ 0.01
TOP3A-204ENST00000472959 GCHFRP30047 84 aa15.14■□□□□ 0.01
TOP3A-204ENST00000472959 OR11H2Q8NH07 326 aa15.14■□□□□ 0.01
TOP3A-204ENST00000472959 SUN5Q8TC36 379 aa15.14■□□□□ 0.01
TOP3A-204ENST00000472959 Q9H3A6 140 aa15.14■□□□□ 0.01
TOP3A-204ENST00000472959 TMEM167BQ9NRX6 74 aa15.14■□□□□ 0.01
TOP3A-204ENST00000472959 TENM3Q9P273 2699 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 BOLA2-SMG1P6H3BVE0 249 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 CSN1S1P47710 185 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 FXYD7P58549 80 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 ZNF726P1Q15940 193 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 FAM74A1Q5RGS3 127 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 EIF5AL1Q6IS14 154 aaKnown RBP15.13■□□□□ 0.01
TOP3A-204ENST00000472959 C9orf62Q8N4C0 152 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 EDA2RQ9HAV5 297 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 OTORQ9NRC9 128 aa15.13■□□□□ 0.01
TOP3A-204ENST00000472959 NPIPB6E9PJ23 425 aa15.12■□□□□ 0.01
TOP3A-204ENST00000472959 SSX7Q7RTT5 188 aa15.12■□□□□ 0.01
TOP3A-204ENST00000472959 SLC51BQ86UW2 128 aa15.12■□□□□ 0.01
TOP3A-204ENST00000472959 RXFP4Q8TDU9 374 aa15.12■□□□□ 0.01
TOP3A-204ENST00000472959 ZNF705EA8MWA4 302 aaPredicted RBP15.11■□□□□ 0.01
TOP3A-204ENST00000472959 PRB4P10163 310 aaPredicted RBP15.11■□□□□ 0.01
TOP3A-204ENST00000472959 DPPA3Q6W0C5 159 aa15.11■□□□□ 0.01
TOP3A-204ENST00000472959 ARL6IP6Q8N6S5 226 aa15.11■□□□□ 0.01
TOP3A-204ENST00000472959 TMED6Q8WW62 240 aa15.11■□□□□ 0.01
TOP3A-204ENST00000472959 IGF2BP2-AS1Q96M15 143 aa15.11■□□□□ 0.01
TOP3A-204ENST00000472959 ODF3Q96PU9 254 aa15.11■□□□□ 0.01
TOP3A-204ENST00000472959 TSPOP30536 169 aa15.1■□□□□ 0.01
TOP3A-204ENST00000472959 SPINK13Q1W4C9 94 aa15.1■□□□□ 0.01
TOP3A-204ENST00000472959 LINC00477Q96M19 166 aa15.1■□□□□ 0.01
TOP3A-204ENST00000472959 PLA2G2EQ9NZK7 142 aa15.1■□□□□ 0.01
TOP3A-204ENST00000472959 GOLT1BQ9Y3E0 138 aa15.1■□□□□ 0.01
TOP3A-204ENST00000472959 MAP1LC3B2A6NCE7 125 aa15.09■□□□□ 0.01
TOP3A-204ENST00000472959 PGPA6NDG6 321 aa15.09■□□□□ 0.01
TOP3A-204ENST00000472959 M0R2Z0 102 aa15.09■□□□□ 0.01
TOP3A-204ENST00000472959 ZNF705AQ6ZN79 300 aaPredicted RBP15.09■□□□□ 0.01
TOP3A-204ENST00000472959 C9orf47Q6ZRZ4 202 aa15.09■□□□□ 0.01
TOP3A-204ENST00000472959 CMTM2Q8TAZ6 248 aa15.09■□□□□ 0.01
TOP3A-204ENST00000472959 MAP1LC3BQ9GZQ8 125 aa15.09■□□□□ 0.01
TOP3A-204ENST00000472959 RBAKDNA6NC62 111 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 INSP01308 110 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 CT45A10P0DMU9 189 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 MIFP14174 115 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 CDKN1BP46527 198 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 FHITP49789 147 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 IQCF2Q8IXL9 164 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 AGPAT4-IT1Q9H0P7 198 aa15.08■□□□□ 0
TOP3A-204ENST00000472959 IGKV2-40A0A087WW87 121 aaPredicted RBP15.07■□□□□ 0
TOP3A-204ENST00000472959 CRXO43186 299 aaPredicted RBP15.07■□□□□ 0
TOP3A-204ENST00000472959 IGKV2D-40P01614 121 aaPredicted RBP15.07■□□□□ 0
TOP3A-204ENST00000472959 SLC25A5P05141 298 aaKnown RBP15.07■□□□□ 0
TOP3A-204ENST00000472959 LEPP41159 167 aa15.07■□□□□ 0
TOP3A-204ENST00000472959 RAB5CP51148 216 aa15.07■□□□□ 0
TOP3A-204ENST00000472959 FAM213BQ8TBF2 198 aa15.07■□□□□ 0
TOP3A-204ENST00000472959 MBD3L1Q8WWY6 194 aa15.07■□□□□ 0
TOP3A-204ENST00000472959 NEU1Q99519 415 aa15.07■□□□□ 0
TOP3A-204ENST00000472959 X6R8D5 127 aa15.07■□□□□ 0
TOP3A-204ENST00000472959 A0A0J9YWU9 116 aa15.06■□□□□ 0
TOP3A-204ENST00000472959 A0A1W2PRE2 83 aa15.06■□□□□ 0
TOP3A-204ENST00000472959 SMIM9A6NGZ8 99 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms