RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 TRAV12-3A0A0B4J271 114 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 H3BQ15 152 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 RGS5O15539 181 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 HYPMO75409 117 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 NXPH4O95158 308 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 RLN2P04090 185 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 IL5P05113 134 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 OR5G3P0C626 314 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 LINC00869P0C866 280 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 SLC25A6P12236 298 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 AKR1C1Q04828 323 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 IL18Q14116 193 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 SAT2Q96F10 170 aaPredicted RBP6.3□□□□□ -1.4
VCL-204ENST00000472585 DIRAS2Q96HU8 199 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 C20orf144Q9BQM9 153 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 GSN-AS1Q9NRJ2 163 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 FAM30AQ9NZY2 134 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 SCP2D1Q9UJQ7 156 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 RABL2BQ9UNT1 228 aa6.3□□□□□ -1.4
VCL-204ENST00000472585 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
VCL-204ENST00000472585 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 IGLV5-52A0A0A0MRZ9 124 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 HOXB5P09067 269 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 RAP2BP61225 183 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
VCL-204ENST00000472585 ARL16Q0P5N6 197 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 TMEM128Q5BJH2 165 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 TEPPQ6URK8 271 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 LYPD5Q6UWN5 251 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 CCDC28AQ8IWP9 274 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 TMEM37Q8WXS4 190 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 ARL6Q9H0F7 186 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 ARV1Q9H2C2 271 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 MCUBQ9NWR8 336 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 KLF12Q9Y4X4 402 aa6.29□□□□□ -1.4
VCL-204ENST00000472585 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 SNURFLB1AK76 121 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
VCL-204ENST00000472585 ANXA3P12429 323 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 RRAS2P62070 204 aaPredicted RBP6.28□□□□□ -1.4
VCL-204ENST00000472585 SRPXP78539 464 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 PPP1R1AQ13522 171 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 SCGB3A2Q96PL1 93 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 CIB3Q96Q77 187 aaPredicted RBP6.28□□□□□ -1.4
VCL-204ENST00000472585 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
VCL-204ENST00000472585 STRAPQ9Y3F4 350 aaKnown RBP6.28□□□□□ -1.4
VCL-204ENST00000472585 TRAV5A0A0B4J249 113 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 K7EPK0 472 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 SPINK4O60575 86 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 MED6O75586 246 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 SFT2D2O95562 160 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 OXTP01178 125 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 IGHV3-53P01767 116 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 IGLC2P0DOY2 106 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
VCL-204ENST00000472585 TNFSF8P32971 234 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 RPP30P78346 268 aaKnown RBP6.27□□□□□ -1.41
VCL-204ENST00000472585 CD300CQ08708 224 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 SLC38A11Q08AI6 406 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 ERCC8Q13216 396 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 FHL2Q14192 279 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 OPCMLQ14982 345 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 LINC00305Q7Z4B0 112 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 CCDC190Q86UF4 302 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 DYNC2LI1Q8TCX1 351 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 FAM19A4Q96LR4 140 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 PSENENQ9NZ42 101 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 TP53TG3Q9ULZ0 132 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 FUT9Q9Y231 359 aa6.27□□□□□ -1.41
VCL-204ENST00000472585 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 TRGV1A0A0A0MS02 117 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 PRAF2O60831 178 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 METTL15P1P0C7V9 234 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 CXCL2P19875 107 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 CRYBA4P53673 196 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 SELENOTP62341 195 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 C4orf46Q504U0 113 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 LCN15Q6UWW0 184 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 TMEM14EPQ6UXP3 125 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
VCL-204ENST00000472585 TRIM63Q969Q1 353 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 PYGO2Q9BRQ0 406 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 NPVFQ9HCQ7 196 aa6.26□□□□□ -1.41
VCL-204ENST00000472585 LRCOL1A6NCL2 159 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 KLLNB2CW77 178 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 M0R3E3 92 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 AGPAT2O15120 278 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 BTN1A1Q13410 526 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 PRR9Q5T870 116 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 SMIM8Q96KF7 97 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 C8orf49Q96NF6 230 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 ODF3Q96PU9 254 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 MGST2Q99735 147 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 LINC00467Q9BRT7 94 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 SLC50A1Q9BRV3 221 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms