RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 CSAG2Q9Y5P2 127 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 DLC1Q96QB1 1528 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 PPLO60437 1756 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 NUMA1Q14980 2115 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 EXPH5Q8NEV8 1989 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 LEPROTO15243 131 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 HCRTO43612 131 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 IGHV3-48P01763 117 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 C3orf79P0CE67 100 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 CGB3P0DN86 165 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 CGB7P0DN87 165 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 HOXB6P17509 224 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 S100A4P26447 101 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 MPV17P39210 176 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 NANOS3P60323 173 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 KRTAP10-2P60368 255 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 PCBD1P61457 104 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 MRPS36P82909 103 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 RPL18Q07020 188 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 EGFEM1PQ0D2K5 195 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 RPL7L1Q6DKI1 246 aaKnown RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 ZNF322Q6U7Q0 402 aaPredicted RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 LYPD5Q6UWN5 251 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 ZNF497Q6ZNH5 498 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 NRACQ8N912 160 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 APCDD1LQ8NCL9 501 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 LINC00476Q8WZB0 136 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 AQP3Q92482 292 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 FAM104AQ969W3 186 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 CLEC7AQ9BXN2 247 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 SMDT1Q9H4I9 107 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 C6orf106Q9H6K1 298 aaPredicted RBP2.33□□□□□ -2.04
TTC3-214ENST00000472398 MANBALQ9NQG1 85 aa2.33□□□□□ -2.04
TTC3-214ENST00000472398 NOTCH4Q99466 2003 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 RNF17Q9BXT8 1623 aaKnown RBP2.32□□□□□ -2.04
TTC3-214ENST00000472398 ABCC8Q09428 1581 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 TDRD6O60522 2096 aaKnown RBP2.32□□□□□ -2.04
TTC3-214ENST00000472398 CDK13Q14004 1512 aaKnown RBP2.32□□□□□ -2.04
TTC3-214ENST00000472398 TRAV2A0A0B4J234 112 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 IGHV5-51A0A0C4DH38 117 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 IGKV1-6A0A0C4DH72 117 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 RPL37AP8A6NKH3 93 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 CCL16O15467 120 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 LY6G6DO95868 133 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 SMIM13P0DJ93 91 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 UBE2G1P62253 170 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 HIST1H4AP62805 103 aaKnown RBP2.32□□□□□ -2.04
TTC3-214ENST00000472398 CCL8P80075 99 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 FHL2Q14192 279 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 KIAA2026Q5HYC2 2103 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 C19orf48Q6RUI8 117 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 SIGLECL1Q8N7X8 197 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 ZNF714Q96N38 554 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 NABP2Q9BQ15 211 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 PLA2G12AQ9BZM1 189 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 NXT2Q9NPJ8 142 aaKnown RBP2.32□□□□□ -2.04
TTC3-214ENST00000472398 ZNF71Q9NQZ8 489 aaPredicted RBP2.32□□□□□ -2.04
TTC3-214ENST00000472398 IL36RNQ9UBH0 155 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 KLK13Q9UKR3 277 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 ADGRL1O94910 1474 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 C1orf167Q5SNV9 1468 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 MED13Q9UHV7 2174 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 HEATR5AQ86XA9 2040 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 COL4A3Q01955 1670 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 COL18A1P39060 1754 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 SCN11AQ9UI33 1791 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 ZNF407Q9C0G0 2248 aa2.32□□□□□ -2.04
TTC3-214ENST00000472398 IGLV3-12A0A075B6K2 115 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 TRAV14DV4A0A0A6YYC5 116 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.31□□□□□ -2.04
TTC3-214ENST00000472398 ATOX1O00244 68 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 DSCR4P56555 118 aaPredicted RBP2.31□□□□□ -2.04
TTC3-214ENST00000472398 HERVK_113P61574 105 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 CXCL6P80162 114 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 LY6G5CQ5SRR4 150 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 FAM104BQ5XKR9 115 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 TIFABQ6ZNK6 161 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 COMMD6Q7Z4G1 85 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 TVP23CQ96ET8 276 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 CST11Q9H112 138 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 IL25Q9H293 177 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 SLC25A22Q9H936 323 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.31□□□□□ -2.04
TTC3-214ENST00000472398 KIF14Q15058 1648 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 SERF1AO75920 110 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
TTC3-214ENST00000472398 CCL4P13236 92 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 ZNF32P17041 273 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 CMC4P56277 68 aaPredicted RBP2.31□□□□□ -2.04
TTC3-214ENST00000472398 TMEM136Q6ZRR5 245 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 C5orf38Q86SI9 138 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 TMEM252Q8N6L7 170 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 CYB561D1Q8N8Q1 229 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 CLEC2BQ92478 149 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 FGF23Q9GZV9 251 aaPredicted RBP2.31□□□□□ -2.04
TTC3-214ENST00000472398 OSTCQ9NRP0 149 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 HILPDAQ9Y5L2 63 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms