RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MT-ND4LP03901 98 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 CKS1BP61024 79 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 C2orf82Q6UX34 121 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 ARPINQ7Z6K5 226 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 OR51A4Q8NGJ6 313 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 CCL4L1Q8NHW4 92 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 NAT14Q8WUY8 206 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 KLK9Q9UKQ9 250 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 FAM135BQ49AJ0 1406 aa2.64□□□□□ -1.99
SMC5-202ENST00000471372 DIDO1Q9BTC0 2240 aaKnown RBP2.64□□□□□ -1.99
SMC5-202ENST00000471372 DLC1Q96QB1 1528 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 C5orf58C9J3I9 102 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 SCTP09683 121 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 MAXP61244 160 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 OR4C12Q96R67 309 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 TMEM138Q9NPI0 162 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 FKBP11Q9NYL4 201 aa2.63□□□□□ -1.99
SMC5-202ENST00000471372 FER1L6Q2WGJ9 1857 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 TNS3Q68CZ2 1445 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 KIAA1107Q9UPP5 1409 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 C9orf170A2RU37 121 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 J3QKU1 62 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 DBIP07108 87 aaKnown RBP2.62□□□□□ -1.99
SMC5-202ENST00000471372 CXCL8P10145 99 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 S100A12P80511 92 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 KRTAP26-1Q6PEX3 210 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 TCTE3Q8IZS6 198 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 OR5A2Q8NGI9 324 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 C4orf3Q8WVX3 66 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 MGAMO43451 1857 aa2.62□□□□□ -1.99
SMC5-202ENST00000471372 CCL16O15467 120 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 OR2H2O95918 312 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 TPT1P13693 172 aaKnown RBP2.61□□□□□ -1.99
SMC5-202ENST00000471372 SRP9P49458 86 aaKnown RBP2.61□□□□□ -1.99
SMC5-202ENST00000471372 CIRBPQ14011 172 aaKnown RBP2.61□□□□□ -1.99
SMC5-202ENST00000471372 PATE1Q8WXA2 126 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 CLEC2BQ92478 149 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 PSMF1Q92530 271 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 BORCS5Q969J3 196 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 MED9Q9NWA0 146 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 DSPPQ9NZW4 1301 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 MED23Q9ULK4 1368 aa2.61□□□□□ -1.99
SMC5-202ENST00000471372 HCRTO43612 131 aa2.6□□□□□ -1.99
SMC5-202ENST00000471372 PAEPP09466 180 aa2.6□□□□□ -1.99
SMC5-202ENST00000471372 TMEM244Q5VVB8 128 aa2.6□□□□□ -1.99
SMC5-202ENST00000471372 CDC42SE1Q9NRR8 79 aa2.6□□□□□ -1.99
SMC5-202ENST00000471372 HSPB8Q9UJY1 196 aa2.6□□□□□ -1.99
SMC5-202ENST00000471372 CEP152O94986 1710 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 LAMB4A4D0S4 1761 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 MYOFQ9NZM1 2061 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 UNQ6190/PRO20217Q6UXQ8 127 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 GKN2Q86XP6 184 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 OR5AS1Q8N127 324 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 CEP192Q8TEP8 1941 aa2.59□□□□□ -1.99
SMC5-202ENST00000471372 CR1P17927 2039 aa2.59□□□□□ -2
SMC5-202ENST00000471372 SCN3AQ9NY46 2000 aa2.58□□□□□ -2
SMC5-202ENST00000471372 TCRAP04437 139 aa2.58□□□□□ -2
SMC5-202ENST00000471372 SLC25A5P05141 298 aaKnown RBP2.58□□□□□ -2
SMC5-202ENST00000471372 MORN2Q502X0 79 aa2.58□□□□□ -2
SMC5-202ENST00000471372 LINC00052Q96N35 136 aa2.58□□□□□ -2
SMC5-202ENST00000471372 ALPK2Q86TB3 2170 aa2.58□□□□□ -2
SMC5-202ENST00000471372 KDM6AO15550 1401 aaPredicted RBP2.58□□□□□ -2
SMC5-202ENST00000471372 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.57□□□□□ -2
SMC5-202ENST00000471372 DIAPH2-AS1Q14236 149 aa2.57□□□□□ -2
SMC5-202ENST00000471372 LINC00269Q8N2A0 174 aa2.57□□□□□ -2
SMC5-202ENST00000471372 AP1S3Q96PC3 154 aa2.57□□□□□ -2
SMC5-202ENST00000471372 NABP2Q9BQ15 211 aa2.57□□□□□ -2
SMC5-202ENST00000471372 CALML5Q9NZT1 146 aa2.57□□□□□ -2
SMC5-202ENST00000471372 RFX7Q2KHR2 1363 aa2.57□□□□□ -2
SMC5-202ENST00000471372 COL4A1P02462 1669 aa2.57□□□□□ -2
SMC5-202ENST00000471372 COL24A1Q17RW2 1714 aa2.56□□□□□ -2
SMC5-202ENST00000471372 IGKV3D-7A0A0C4DH55 119 aa2.56□□□□□ -2
SMC5-202ENST00000471372 IGKV3OR2-268A0A0C4DH90 116 aa2.56□□□□□ -2
SMC5-202ENST00000471372 TRACP01848 142 aa2.56□□□□□ -2
SMC5-202ENST00000471372 HBDP02042 147 aa2.56□□□□□ -2
SMC5-202ENST00000471372 SLC25A4P12235 298 aa2.56□□□□□ -2
SMC5-202ENST00000471372 BLCAPP62952 87 aa2.56□□□□□ -2
SMC5-202ENST00000471372 PSPHP78330 225 aa2.56□□□□□ -2
SMC5-202ENST00000471372 SARNPP82979 210 aaKnown RBP2.56□□□□□ -2
SMC5-202ENST00000471372 SMIM21Q3B7S5 101 aa2.56□□□□□ -2
SMC5-202ENST00000471372 FAM74A1Q5RGS3 127 aa2.56□□□□□ -2
SMC5-202ENST00000471372 CYSTM1Q9H1C7 97 aa2.56□□□□□ -2
SMC5-202ENST00000471372 ORMDL1Q9P0S3 153 aa2.56□□□□□ -2
SMC5-202ENST00000471372 SNURFQ9Y675 71 aa2.56□□□□□ -2
SMC5-202ENST00000471372 F8W1H4 67 aa2.55□□□□□ -2
SMC5-202ENST00000471372 UQCRQO14949 82 aa2.55□□□□□ -2
SMC5-202ENST00000471372 SAA1P0DJI8 122 aaPredicted RBP2.55□□□□□ -2
SMC5-202ENST00000471372 LAMB2P55268 1798 aa2.55□□□□□ -2
SMC5-202ENST00000471372 HIST1H1AQ02539 215 aaPredicted RBP2.55□□□□□ -2
SMC5-202ENST00000471372 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
SMC5-202ENST00000471372 MYLKQ15746 1914 aa2.55□□□□□ -2
SMC5-202ENST00000471372 HSD17B12Q53GQ0 312 aa2.55□□□□□ -2
SMC5-202ENST00000471372 FAM19A2Q8N3H0 131 aa2.55□□□□□ -2
SMC5-202ENST00000471372 OR5AK2Q8NH90 309 aa2.55□□□□□ -2
SMC5-202ENST00000471372 CST11Q9H112 138 aa2.55□□□□□ -2
SMC5-202ENST00000471372 SDK1Q7Z5N4 2213 aa2.54□□□□□ -2
SMC5-202ENST00000471372 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
SMC5-202ENST00000471372 HAGHLQ6PII5 290 aaPredicted RBP2.54□□□□□ -2
SMC5-202ENST00000471372 FOXI2Q6ZQN5 318 aa2.54□□□□□ -2
SMC5-202ENST00000471372 ZNF431Q8TF32 576 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms