RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 I3L521 148 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 NCR3O14931 201 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 FADS1O60427 444 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 HYPMO75409 117 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 ERC2-IT1O76042 136 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 OR5F1O95221 314 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 YEATS4O95619 227 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 CRYGSP22914 178 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 NFYAP23511 347 aaPredicted RBP-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 CD40LGP29965 261 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 S100A7P31151 101 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 RAB13P51153 203 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 SUPT4H1P63272 117 aaKnown RBP-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 MT1XP80297 61 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 HLA-DRB5Q30154 266 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 TNFAIP8L3Q5GJ75 292 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 SBSNQ6UWP8 590 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 LCN15Q6UWW0 184 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 COPS6Q7L5N1 327 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 AAED1Q7RTV5 226 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 LYG2Q86SG7 212 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 OR7G1Q8NGA0 311 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 OR5L1Q8NGL2 311 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 OR2T27Q8NH04 317 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 DDI1Q8WTU0 396 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 ANKRD7Q92527 254 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 ANKRD36BP1Q96IX9 119 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 NDEL1Q9GZM8 345 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 CXorf21Q9HAI6 301 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 GPR84Q9NQS5 396 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 ACER3Q9NUN7 267 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 EURLQ9NYK6 297 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 CFAP45Q9UL16 551 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 TP53TG1Q9Y2A0 90 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 DSPPQ9NZW4 1301 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 PDCD11Q14690 1871 aaKnown RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 MYH1P12882 1939 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 FXYD6-FXYD2A0A087WZ82 144 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 A0A0D9SG42 100 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 FUOMA2VDF0 154 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 GGT3PA6NGU5 568 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 C2orf70A6NJV1 201 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 CCRL2O00421 344 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 INE1O15225 51 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 STX10O60499 249 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 NEMFO60524 1076 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 IGF2P01344 180 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 IGHV3-7P01780 117 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 APOA1P02647 267 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 CLPSP04118 112 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 IL6P05231 212 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 CCDC172P0C7W6 258 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 CCL4P13236 92 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 ZNF25P17030 456 aaPredicted RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 KDELR2P33947 212 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 EIF2B2P49770 351 aaKnown RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 ZNF80P51504 273 aaPredicted RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 OR4D2P58180 307 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 RAB4BP61018 213 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 RPL18Q07020 188 aaKnown RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 KCNJ8Q15842 424 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 FBXO48Q5FWF7 155 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 ZNF550Q7Z398 422 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 OOSP2Q86WS3 158 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 LRRC25Q8N386 305 aaPredicted RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 LINC00311Q8N616 119 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 HAVCR2Q8TDQ0 301 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 SLC37A2Q8TED4 501 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 TSKUQ8WUA8 353 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 PLAC4Q8WY50 150 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 C11orf40Q8WZ69 217 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 BORCS5Q969J3 196 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 PACRGQ96M98 296 aaPredicted RBP-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 SLC50A1Q9BRV3 221 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 TIPINQ9BVW5 301 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 TTTY10Q9BZA0 68 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 SLC22A4Q9H015 551 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 C1orf109Q9NX04 203 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 COQ4Q9Y3A0 265 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 U3KQA8 63 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 ANKARQ7Z5J8 1434 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 EVC2Q86UK5 1308 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 RAD50Q92878 1312 aa-0.14□□□□□ -2.43
UBXN4-207ENST00000471246 SPEF2Q9C093 1822 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 TRBV20-1A0A075B6N2 111 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 A0A087WSZ3 146 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 TRBV6-8A0A0A6YYG3 113 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 A0A0G2JMM0 328 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 C1orf232A0A0U1RR37 186 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 A0A1W2PPB8 328 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 A0A1W2PRS3 328 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 TCRBV4S1A1TA0A5B7 111 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 KIR3DP1A8MWS1 328 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 K7EP13 123 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 LST1O00453 97 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 OR1I1O60431 355 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 ATP6V1G2O95670 118 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 C1QAP02745 245 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 APODP05090 189 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 ASAH2BP0C7U1 165 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms