RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
SF3A1-206ENST00000471037 GUK1Q16774 197 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 DEFB135Q30KP9 77 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 SIGLEC15Q6ZMC9 328 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
SF3A1-206ENST00000471037 IQCF2Q8IXL9 164 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 KIR2DL5AQ8N109 375 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 KIR2DL5BQ8NHK3 375 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 SUN5Q8TC36 379 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
SF3A1-206ENST00000471037 DNAH10Q8IVF4 4471 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 IGHV3OR16-13A0A075B7E8 117 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 A0A087X0K7 114 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 IGHV3-74A0A0B4J1X5 117 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 A0A1B0GV50 99 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 TSPAN4O14817 238 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.34
SF3A1-206ENST00000471037 IFNA1P01562 189 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 OR10J4P0C629 311 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 PYYP10082 97 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 PDE6HQ13956 83 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 ODF3L2Q3SX64 289 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 LGALS9CQ6DKI2 356 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 PCNPQ8WW12 178 aaKnown RBP6.68□□□□□ -1.34
SF3A1-206ENST00000471037 RNF183Q96D59 192 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 MANBALQ9NQG1 85 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 ARL2-SNX15V9GYD0 113 aa6.68□□□□□ -1.34
SF3A1-206ENST00000471037 ZNF253O75346 499 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 NBEAP1P0C6P0 100 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 FAM90A2PQ658T7 463 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 TCF24Q7RTU0 167 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 TMPRSS5Q9H3S3 457 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 MED9Q9NWA0 146 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 GNG13Q9P2W3 67 aa6.67□□□□□ -1.34
SF3A1-206ENST00000471037 TRBV19A0A075B6N1 114 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 OR4C46A6NHA9 309 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 H3BQ15 152 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 BCL2P10415 239 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
SF3A1-206ENST00000471037 CCL20P78556 96 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 LYPD1Q8N2G4 141 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 PHLDA1Q8WV24 401 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-206ENST00000471037 BLNKQ8WV28 456 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 SLC50A1Q9BRV3 221 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 NKX6-2Q9C056 277 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-206ENST00000471037 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 NRN1Q9NPD7 142 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 ZNF586Q9NXT0 402 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 HECTD4Q9Y4D8 3996 aa6.66□□□□□ -1.34
SF3A1-206ENST00000471037 TRAV2A0A0B4J234 112 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 A0A1W2PRE2 83 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 RAB19A4D1S5 217 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 LINC00862A6NCI5 91 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 FAM74A7A6NL05 159 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.34
SF3A1-206ENST00000471037 PAFAH1B2P68402 229 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 PSG9Q00887 426 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 FAM210AQ96ND0 272 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 AAMDCQ9H7C9 122 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 CLEC5AQ9NY25 188 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
SF3A1-206ENST00000471037 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 ISLRO14498 428 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 PAGE4O60829 102 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 NDUFB4O95168 129 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 UBE2G2P60604 165 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 MEF2BQ02080 365 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-206ENST00000471037 NDUFA5Q16718 116 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 TOR2AQ5JU69 321 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 CST9LP1Q5W188 147 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 C17orf77Q96MU5 243 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 TCEAL7Q9BRU2 100 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 MS4A6AQ9H2W1 248 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 Q9H3A6 140 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 C11orf68Q9H3H3 251 aaKnown RBP6.64□□□□□ -1.35
SF3A1-206ENST00000471037 SMDT1Q9H4I9 107 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 ZNF331Q9NQX6 463 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-206ENST00000471037 OTORQ9NRC9 128 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 PRELID1Q9Y255 219 aa6.64□□□□□ -1.35
SF3A1-206ENST00000471037 YTHDF2Q9Y5A9 579 aaKnown RBP6.64□□□□□ -1.35
SF3A1-206ENST00000471037 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 IGKV3-7A0A075B6H7 116 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 H3BTX0 84 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 DNASE2O00115 360 aaPredicted RBP6.63□□□□□ -1.35
SF3A1-206ENST00000471037 SLC17A3O00476 420 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 SOCS3O14543 225 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 SNRPCP09234 159 aaKnown RBP6.63□□□□□ -1.35
SF3A1-206ENST00000471037 RPL35AP18077 110 aaKnown RBP6.63□□□□□ -1.35
SF3A1-206ENST00000471037 ID1P41134 155 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 TCTAP57738 103 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 RANP62826 216 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms