RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 HAGHQ16775 308 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 PSMG4Q5JS54 123 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 ZNF506Q5JVG8 444 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
SREBF1-209ENST00000470247 GDF5OSQ5U4N7 250 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 CST9LP1Q5W188 147 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 MRPL53Q96EL3 112 aaKnown RBP8.35□□□□□ -1.07
SREBF1-209ENST00000470247 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 FAM110AQ9BQ89 295 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 PRELID1Q9Y255 219 aa8.35□□□□□ -1.07
SREBF1-209ENST00000470247 AGRNO00468 2067 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 C9JQL5 133 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 F6UB75 175 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 SNRPD3P62318 126 aaKnown RBP8.34□□□□□ -1.07
SREBF1-209ENST00000470247 GNG5P63218 68 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
SREBF1-209ENST00000470247 APRG1Q8IVJ8 170 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 ARL6IP6Q8N6S5 226 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 C5orf17Q8NAS9 161 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
SREBF1-209ENST00000470247 PRR25Q96S07 402 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 NKX6-2Q9C056 277 aaPredicted RBP8.34□□□□□ -1.07
SREBF1-209ENST00000470247 WFDC10AQ9H1F0 79 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 AAMDCQ9H7C9 122 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 VAX2Q9UIW0 290 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 EPDR1Q9UM22 224 aa8.34□□□□□ -1.07
SREBF1-209ENST00000470247 LINC00862A6NCI5 91 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 DIRC3C9JPN6 131 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 C11orf94C9JXX5 98 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 SLC25A5P05141 298 aaKnown RBP8.33□□□□□ -1.08
SREBF1-209ENST00000470247 TAGLN2P37802 199 aaKnown RBP8.33□□□□□ -1.08
SREBF1-209ENST00000470247 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
SREBF1-209ENST00000470247 TOR2AQ5JU69 321 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 ZNF738Q8NE65 137 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 RXFP4Q8TDU9 374 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 TXNDC17Q9BRA2 123 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
SREBF1-209ENST00000470247 IGKV2-40A0A087WW87 121 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 A0A0J9YX75 114 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 SCO2A0A1W2PP80 73 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 KNCNA6PVL3 124 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 OR11H12B2RN74 326 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 IFNA1P01562 189 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 IGKV2D-40P01614 121 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 IGLV2-11P01706 119 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 TCRAP04437 139 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 ZNF705DP0CH99 300 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 ZNF705BP0CI00 300 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 OR8A1Q8NGG7 326 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 C2CD4CQ8TF44 421 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 VGLL1Q99990 258 aa8.32□□□□□ -1.08
SREBF1-209ENST00000470247 SAV1Q9H4B6 383 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-209ENST00000470247 RAB19A4D1S5 217 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 A8MTW9 85 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 H3BMM0 161 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 SRP19P09132 144 aaKnown RBP8.31□□□□□ -1.08
SREBF1-209ENST00000470247 ERCC8Q13216 396 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 GOLT1AQ6ZVE7 132 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 DEFB125Q8N687 156 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 HIST1H2BAQ96A08 127 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 C11orf52Q96A22 123 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 LINC00479Q96M42 142 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 AGPAT4-IT1Q9H0P7 198 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
SREBF1-209ENST00000470247 TRAV8-1A0A0A6YYK1 113 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 TRAV34A0A0B4J273 112 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 RBMY1BA6NDE4 496 aaKnown RBP8.3□□□□□ -1.08
SREBF1-209ENST00000470247 RBMY1EA6NEQ0 496 aaKnown RBP8.3□□□□□ -1.08
SREBF1-209ENST00000470247 NPIPB6E9PJ23 425 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 PEX7O00628 323 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 RBMY1DP0C7P1 496 aaKnown RBP8.3□□□□□ -1.08
SREBF1-209ENST00000470247 HLA-DRB4P13762 266 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 CSN1S1P47710 185 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 AMTNQ6UX39 209 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 GTSCR1Q86UQ5 136 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 TCEAL7Q9BRU2 100 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 ATG101Q9BSB4 218 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 EIF5A2Q9GZV4 153 aaKnown RBP8.3□□□□□ -1.08
SREBF1-209ENST00000470247 ZMAT5Q9UDW3 170 aaKnown RBP8.3□□□□□ -1.08
SREBF1-209ENST00000470247 HLA-DRB4X5D2U9 266 aa8.3□□□□□ -1.08
SREBF1-209ENST00000470247 DNAH3Q8TD57 4116 aa8.29□□□□□ -1.08
SREBF1-209ENST00000470247 PDE6DO43924 150 aa8.29□□□□□ -1.08
SREBF1-209ENST00000470247 CT45A10P0DMU9 189 aa8.29□□□□□ -1.08
SREBF1-209ENST00000470247 CNN1P51911 297 aaKnown RBP8.29□□□□□ -1.08
SREBF1-209ENST00000470247 HIST1H1AQ02539 215 aaPredicted RBP8.29□□□□□ -1.08
SREBF1-209ENST00000470247 TRPT1Q86TN4 253 aaKnown RBP8.29□□□□□ -1.08
SREBF1-209ENST00000470247 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
SREBF1-209ENST00000470247 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
SREBF1-209ENST00000470247 TVP23CQ96ET8 276 aa8.29□□□□□ -1.08
SREBF1-209ENST00000470247 FAM19A4Q96LR4 140 aa8.29□□□□□ -1.08
SREBF1-209ENST00000470247 SGK494Q96LW2 274 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms