RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IGKV2D-40P01614 121 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-209ENST00000470026 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 RPS20P60866 119 aaKnown RBP10.63□□□□□ -0.71
BRCA1-209ENST00000470026 SIGLEC8Q9NYZ4 499 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 PIEZO2Q9H5I5 2752 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 D6R8Y8 96 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 FAM106CPP0CH98 169 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 PRB4P10163 310 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-209ENST00000470026 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-209ENST00000470026 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 RELQ04864 619 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-209ENST00000470026 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 DTX2Q86UW9 622 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 MCRIP2Q9BUT9 160 aaKnown RBP10.62□□□□□ -0.71
BRCA1-209ENST00000470026 NPFFR1Q9GZQ6 430 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 RABAC1Q9UI14 185 aa10.62□□□□□ -0.71
BRCA1-209ENST00000470026 ANKHD1Q8IWZ3 2542 aaKnown RBP10.62□□□□□ -0.71
BRCA1-209ENST00000470026 IGHV2-70DA0A0C4DH43 119 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 A0A1W2PRD5 423 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 A0A1W2PRF3 423 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 A0A1W2PRM7 423 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 SCGB2A1O75556 95 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 NCR2O95944 276 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 COX8AP10176 69 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-209ENST00000470026 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 DEFB125Q8N687 156 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 Q8N9W7 124 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 CNFNQ9BYD5 112 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 MSRB2Q9Y3D2 182 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 OR2T8A6NH00 312 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 NCBP2LA6PVI3 153 aaKnown RBP10.61□□□□□ -0.71
BRCA1-209ENST00000470026 NUDT3O95989 172 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 SFTPCP11686 197 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 BMI1P35226 326 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-209ENST00000470026 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-209ENST00000470026 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
BRCA1-209ENST00000470026 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 SIRPDQ9H106 197 aa10.61□□□□□ -0.71
BRCA1-209ENST00000470026 PTPRQQ9UMZ3 2332 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 A0A087X0K7 114 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 TAX1BP3O14907 124 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 S100A7P31151 101 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 IGHV3-23P01764 117 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 TMEM11P17152 192 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 ZFP36P26651 326 aaKnown RBP10.6□□□□□ -0.71
BRCA1-209ENST00000470026 LGALS9BQ3B8N2 356 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 FAM110DQ8TAY7 271 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-209ENST00000470026 ZNF502Q8TBZ5 544 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 AJUBAQ96IF1 538 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 VGLL1Q99990 258 aa10.6□□□□□ -0.71
BRCA1-209ENST00000470026 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 K7EP13 123 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 RHOGP84095 191 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 C2orf91Q6ZV80 131 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 TLN1Q9Y490 2541 aaKnown RBP10.59□□□□□ -0.71
BRCA1-209ENST00000470026 ABCA4P78363 2273 aa10.59□□□□□ -0.71
BRCA1-209ENST00000470026 TPRP12270 2363 aaKnown RBP10.58□□□□□ -0.72
BRCA1-209ENST00000470026 FGF6P10767 208 aa10.58□□□□□ -0.72
BRCA1-209ENST00000470026 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
BRCA1-209ENST00000470026 H0Y8G0 127 aa10.58□□□□□ -0.72
BRCA1-209ENST00000470026 RAB9AP51151 201 aa10.58□□□□□ -0.72
BRCA1-209ENST00000470026 KLRB1Q12918 225 aa10.58□□□□□ -0.72
BRCA1-209ENST00000470026 Q8TAT8 98 aa10.58□□□□□ -0.72
BRCA1-209ENST00000470026 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 CD5LO43866 347 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 HBDP02042 147 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 BUB3O43684 328 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 NPYP01303 97 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 GPR183P32249 361 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 RNF185Q96GF1 192 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 CBY1Q9Y3M2 126 aa10.57□□□□□ -0.72
BRCA1-209ENST00000470026 MUC6Q6W4X9 2439 aa10.56□□□□□ -0.72
BRCA1-209ENST00000470026 DCHS1Q96JQ0 3298 aa10.56□□□□□ -0.72
BRCA1-209ENST00000470026 FABP5P3A8MUU1 101 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 PPBPP02775 128 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 UBE2E1P51965 193 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 UCNP55089 124 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 TIMM8BQ9Y5J9 83 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-209ENST00000470026 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 CLPSL1A2RUU4 121 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 CKS2P33552 79 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 FOXE3Q13461 319 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms