RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 UBE2DNLQ8IWF7 75 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 TEX43Q6ZNM6 134 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 FAM215AQ9Y5M1 114 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 TEX36Q5VZQ5 186 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 WDR81Q562E7 1941 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 SNHG12Q9BXW3 62 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 LSM4Q9Y4Z0 139 aaKnown RBP12.7□□□□□ -0.38
BRAT1-204ENST00000469750 CFHR2P36980 270 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 DEFB131AP59861 70 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 MPV17L2Q567V2 206 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
BRAT1-204ENST00000469750 TSC2P49815 1807 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 DUX4L9Q6RFH8 374 aaPredicted RBP12.69□□□□□ -0.38
BRAT1-204ENST00000469750 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 NPSP0C0P6 89 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 ERCC8Q13216 396 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 IGLV3-9A0A075B6K5 115 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 LINC00311Q8N616 119 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 PLEKHB2Q96CS7 222 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 PTPRDP23468 1912 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
BRAT1-204ENST00000469750 Q96MF0 132 aa12.68□□□□□ -0.38
BRAT1-204ENST00000469750 FAM90A2PQ658T7 463 aa12.68□□□□□ -0.38
BRAT1-204ENST00000469750 DEFB104AQ8WTQ1 72 aa12.68□□□□□ -0.38
BRAT1-204ENST00000469750 NAA38Q9BRA0 125 aaKnown RBP12.68□□□□□ -0.38
BRAT1-204ENST00000469750 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.68□□□□□ -0.38
BRAT1-204ENST00000469750 C3orf56Q8N813 242 aa12.68□□□□□ -0.38
BRAT1-204ENST00000469750 ATP6V0BQ99437 205 aa12.68□□□□□ -0.38
BRAT1-204ENST00000469750 DMRTC2Q8IXT2 367 aaPredicted RBP12.67□□□□□ -0.38
BRAT1-204ENST00000469750 LINC00479Q96M42 142 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 G3V318 75 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 RASL10AQ92737 203 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 MRPL27Q9P0M9 148 aaKnown RBP12.67□□□□□ -0.38
BRAT1-204ENST00000469750 RSPO1Q2MKA7 263 aaPredicted RBP12.67□□□□□ -0.38
BRAT1-204ENST00000469750 S100A7L2Q5SY68 101 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 AMN1Q8IY45 258 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 TMEM256Q8N2U0 113 aa12.67□□□□□ -0.38
BRAT1-204ENST00000469750 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 A0A087WWL8 130 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 LINC01619G3V211 115 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 ARMS2P0C7Q2 107 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 PRSS33Q8NF86 280 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 C1orf159Q96HA4 380 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 NLRC5Q86WI3 1866 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 ADAMTSL5Q6ZMM2 481 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 TMEM158Q8WZ71 300 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 M0R2P5 195 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 CR1LQ2VPA4 569 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 FANCMQ8IYD8 2048 aa12.66□□□□□ -0.38
BRAT1-204ENST00000469750 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
BRAT1-204ENST00000469750 LIME1Q9H400 295 aa12.65□□□□□ -0.38
BRAT1-204ENST00000469750 PCNX1Q96RV3 2341 aa12.65□□□□□ -0.38
BRAT1-204ENST00000469750 J3QLI3 93 aa12.65□□□□□ -0.38
BRAT1-204ENST00000469750 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-204ENST00000469750 SMKR1H3BMG3 65 aa12.65□□□□□ -0.39
BRAT1-204ENST00000469750 C15orf65H3BRN8 121 aa12.65□□□□□ -0.39
BRAT1-204ENST00000469750 KIR3DS1Q14943 382 aa12.65□□□□□ -0.39
BRAT1-204ENST00000469750 DLX4Q92988 240 aaPredicted RBP12.65□□□□□ -0.39
BRAT1-204ENST00000469750 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-204ENST00000469750 GGTLC3B5MD39 225 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 JPT2Q9H910 190 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 ZNF492Q9P255 531 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 YLPM1P49750 1951 aaKnown RBP12.64□□□□□ -0.39
BRAT1-204ENST00000469750 J3QKU1 62 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 DEFB130BP0DP73 79 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 DEFB130AP0DP74 79 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 PAX9P55771 341 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 ATXN8Q156A1 80 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 EDA2RQ9HAV5 297 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-204ENST00000469750 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
BRAT1-204ENST00000469750 A0A087X0K7 114 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 C3orf79P0CE67 100 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 MYLKQ15746 1914 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 E9PQ18 207 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 TRBV19A0A075B6N1 114 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 PAX4O43316 350 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 GUSBP1Q15486 140 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 TANC1Q9C0D5 1861 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
BRAT1-204ENST00000469750 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-204ENST00000469750 HEATR5AQ86XA9 2040 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■■□□ 17.2
BRAT1-204ENST00000469750 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 SYS1-DBNDD2H3BUS1 97 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 DKK1O94907 266 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 PFN1P07737 140 aaKnown RBP12.62□□□□□ -0.39
BRAT1-204ENST00000469750 XCL2Q9UBD3 114 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 KAAG1Q9UBP8 84 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 C6orf226Q5I0X4 101 aa12.62□□□□□ -0.39
BRAT1-204ENST00000469750 C9orf153Q5TBE3 101 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms