RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 C10orf91Q5T1B1 145 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 SPATA3Q8NHX4 192 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 HIST1H2BAQ96A08 127 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 SPAG8Q99932 426 aaPredicted RBP6.11□□□□□ -1.43
NPHP3-204ENST00000469232 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 MS4A6AQ9H2W1 248 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 Q9H3A6 140 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 ZNF256Q9Y2P7 627 aaPredicted RBP6.11□□□□□ -1.43
NPHP3-204ENST00000469232 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
NPHP3-204ENST00000469232 A8MTW9 85 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 PF4P02776 101 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 RANP62826 216 aaKnown RBP6.1□□□□□ -1.43
NPHP3-204ENST00000469232 SUMO1P63165 101 aaKnown RBP6.1□□□□□ -1.43
NPHP3-204ENST00000469232 BEAN1Q3B7T3 259 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 TMEM61Q8N0U2 210 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 RPUSD4Q96CM3 377 aaKnown RBP6.1□□□□□ -1.43
NPHP3-204ENST00000469232 MCRIP2Q9BUT9 160 aaKnown RBP6.1□□□□□ -1.43
NPHP3-204ENST00000469232 PPP1R14DQ9NXH3 145 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 EPDR1Q9UM22 224 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 SERTM2A0A1B0GWG4 89 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 TMEM218A2RU14 115 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 PGPA6NDG6 321 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 UBE2G2P60604 165 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 PSG3Q16557 428 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 CD300EQ496F6 205 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-204ENST00000469232 COX8CQ7Z4L0 72 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 RXFP4Q8TDU9 374 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 BLNKQ8WV28 456 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 EIF5A2Q9GZV4 153 aaKnown RBP6.1□□□□□ -1.43
NPHP3-204ENST00000469232 SLC35B3Q9H1N7 401 aa6.1□□□□□ -1.43
NPHP3-204ENST00000469232 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 PKD1L1Q8TDX9 2849 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 FBLL1A6NHQ2 334 aaKnown RBP6.09□□□□□ -1.43
NPHP3-204ENST00000469232 DIRC3C9JPN6 131 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 H3BTX0 84 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 PAX4O43316 350 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 IGLV2-11P01706 119 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 TCRAP04437 139 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 SLC25A5P05141 298 aaKnown RBP6.09□□□□□ -1.43
NPHP3-204ENST00000469232 C9orf66Q5T8R8 295 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 CST9LP1Q5W188 147 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 LCN12Q6JVE5 192 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 IQCF2Q8IXL9 164 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 DYNLRB2Q8TF09 96 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 C20orf173Q96LM9 149 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 ATG101Q9BSB4 218 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 AAMDCQ9H7C9 122 aa6.09□□□□□ -1.43
NPHP3-204ENST00000469232 IZUMO1RA6ND01 250 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 C9JCJ5 164 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 M0R3E3 92 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 PEX7O00628 323 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 S100A9P06702 114 aaKnown RBP6.08□□□□□ -1.44
NPHP3-204ENST00000469232 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
NPHP3-204ENST00000469232 ID1P41134 155 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 PAFAH1B2P68402 229 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 FAM74A3Q4VXF1 159 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 C9orf47Q6ZRZ4 202 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 FAM24BQ8N5W8 94 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 CYB561D1Q8N8Q1 229 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 CLUHP3Q96NS8 147 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 C19orf73Q9NVV2 129 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 CARHSP1Q9Y2V2 147 aaKnown RBP6.08□□□□□ -1.44
NPHP3-204ENST00000469232 LY96Q9Y6Y9 160 aa6.08□□□□□ -1.44
NPHP3-204ENST00000469232 TRBV20OR9-2A0A075B6H5 130 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 TRBV7-9A0A0J9YWB2 115 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 OR4C46A6NHA9 309 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 ADCYAP1P18509 176 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 HLA-DMBP28068 263 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 TAS2R60P59551 318 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 TMEM183BQ1AE95 376 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 PRR31Q5SQ13 230 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 TMEM75Q8N9X5 138 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 SMIM12Q96EX1 92 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 C16orf92Q96LL3 132 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 IGF2BP2-AS1Q96M15 143 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 MLST8Q9BVC4 326 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 SEC11CQ9BY50 192 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 GPR61Q9BZJ8 451 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 KRBOX1C9JBD0 128 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 PRAC2D3DTV9 90 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 NPIPB6E9PJ23 425 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 SAP30O75446 220 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 SFTA3P0C7M3 94 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 CMC4P56277 68 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-204ENST00000469232 EGFEM1PQ0D2K5 195 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 ODF3L2Q3SX64 289 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 RBPMS2Q6ZRY4 209 aaKnown RBP6.07□□□□□ -1.44
NPHP3-204ENST00000469232 RNF182Q8N6D2 247 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 FAM19A4Q96LR4 140 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 ODF3Q96PU9 254 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 TREM1Q9NP99 234 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
NPHP3-204ENST00000469232 ZNF705FA8MVS1 300 aaPredicted RBP6.06□□□□□ -1.44
NPHP3-204ENST00000469232 LTAP01374 205 aa6.06□□□□□ -1.44
NPHP3-204ENST00000469232 IGLV2-8P01709 118 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms