RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 CCNKO75909 580 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 SCGB1D2O95969 90 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 M6PRP20645 277 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 HOXA5P20719 270 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 OR10J6PQ8NGY7 276 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 SMIM8Q96KF7 97 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 PARD6GQ9BYG4 376 aaPredicted RBP8.48□□□□□ -1.05
COL5A1-207ENST00000469093 ARL6Q9H0F7 186 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 ARV1Q9H2C2 271 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 Q9H3A6 140 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 NPVFQ9HCQ7 196 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
COL5A1-207ENST00000469093 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
COL5A1-207ENST00000469093 K7EPK0 472 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 CCSO14618 274 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 SNRPCP09234 159 aaKnown RBP8.47□□□□□ -1.05
COL5A1-207ENST00000469093 RRAS2P62070 204 aaPredicted RBP8.47□□□□□ -1.05
COL5A1-207ENST00000469093 DLK1P80370 383 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 CYCSP99999 105 aaKnown RBP8.47□□□□□ -1.05
COL5A1-207ENST00000469093 TMEM14EPQ6UXP3 125 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 S100A7AQ86SG5 101 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 ZBTB8BQ8NAP8 495 aaPredicted RBP8.47□□□□□ -1.05
COL5A1-207ENST00000469093 C2orf50Q96LR7 162 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 C20orf144Q9BQM9 153 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
COL5A1-207ENST00000469093 GAGE12BA1L429 117 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 FNDC10F2Z333 226 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 H3BNG1 76 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 GAGE7O76087 117 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 METTL15P1P0C7V9 234 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 GAGE12FP0CL80 117 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 GAGE12GP0CL81 117 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 GAGE12IP0CL82 117 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 CXCL2P19875 107 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 BTF3P20290 206 aaKnown RBP8.46□□□□□ -1.06
COL5A1-207ENST00000469093 SLC38A11Q08AI6 406 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 TTC32Q5I0X7 151 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 GFI1BQ5VTD9 330 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 CCDC28AQ8IWP9 274 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 OR10P1Q8NGE3 313 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 RNF24Q9Y225 148 aa8.46□□□□□ -1.06
COL5A1-207ENST00000469093 A0A1W2PPQ1 181 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 L7N2F9 121 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 SSSCA1O60232 199 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 PVALBP20472 110 aaPredicted RBP8.45□□□□□ -1.06
COL5A1-207ENST00000469093 S100A10P60903 97 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 VAMP2P63027 116 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 PXDC1Q5TGL8 231 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 TEPPQ6URK8 271 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 LCN15Q6UWW0 184 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 LINC00305Q7Z4B0 112 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 TMEM37Q8WXS4 190 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 SLC50A1Q9BRV3 221 aa8.45□□□□□ -1.06
COL5A1-207ENST00000469093 MRPS16Q9Y3D3 137 aaKnown RBP8.45□□□□□ -1.06
COL5A1-207ENST00000469093 H3BTX0 84 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 SLC17A3O00476 420 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 RLN2P04090 185 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 PET100P0DJ07 73 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 ARL16Q0P5N6 197 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 MORN5Q5VZ52 161 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
COL5A1-207ENST00000469093 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 BOLA1Q9Y3E2 137 aa8.44□□□□□ -1.06
COL5A1-207ENST00000469093 H3BQ15 152 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 AGPAT2O15120 278 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 SIX6O95475 246 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 IGLC2P0DOY2 106 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 TAS2R30P59541 319 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 DAZ2Q13117 558 aaKnown RBP8.43□□□□□ -1.06
COL5A1-207ENST00000469093 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 ASB13Q8WXK3 278 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
COL5A1-207ENST00000469093 LSM5Q9Y4Y9 91 aaKnown RBP8.43□□□□□ -1.06
COL5A1-207ENST00000469093 A0A096LPF7 62 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 SNURFLB1AK76 121 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 J3KRW8 73 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 TSC22D2O75157 780 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 BCAP31P51572 246 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 OPCMLQ14982 345 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 Q6ZNX1 250 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 Q6ZTI0 123 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 NMES1Q9C002 83 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
COL5A1-207ENST00000469093 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
COL5A1-207ENST00000469093 hCG_2014768A0A024R1R8 64 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 COX7A2P2O60397 106 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 MBPP02686 304 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-207ENST00000469093 GIPP09681 153 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-207ENST00000469093 LEPP41159 167 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 LINC00315P59091 139 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 C10orf113Q5VZT2 155 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-207ENST00000469093 ODF3Q96PU9 254 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms