RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ROPN1LQ96C74 230 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 Q9BRP9 147 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 MIEN1Q9BRT3 115 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 WDR61Q9GZS3 305 aaKnown RBP2.03□□□□□ -2.08
LSM5-209ENST00000468872 FBXL12Q9NXK8 326 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 SLC35A3Q9Y2D2 325 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 NDUFAF1Q9Y375 327 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 FAM215AQ9Y5M1 114 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 HRNRQ86YZ3 2850 aaPredicted RBP2.03□□□□□ -2.08
LSM5-209ENST00000468872 STARD9Q9P2P6 4700 aa2.03□□□□□ -2.09
LSM5-209ENST00000468872 PLCE1Q9P212 2302 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 A0A1B0GV72 72 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 TRAPPC13A5PLN9 417 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 NBEAP1P0C6P0 100 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 TFAMQ00059 246 aaKnown RBP2.02□□□□□ -2.09
LSM5-209ENST00000468872 C3orf33Q6P1S2 294 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 ST6GALNAC3Q8NDV1 305 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 RNASE11Q8TAA1 199 aaKnown RBP2.02□□□□□ -2.09
LSM5-209ENST00000468872 C12orf43Q96C57 262 aaKnown RBP2.02□□□□□ -2.09
LSM5-209ENST00000468872 RMND5BQ96G75 393 aaPredicted RBP2.02□□□□□ -2.09
LSM5-209ENST00000468872 NMNAT3Q96T66 252 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 MIXL1Q9H2W2 232 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 C11orf68Q9H3H3 251 aaKnown RBP2.02□□□□□ -2.09
LSM5-209ENST00000468872 FAM96AQ9H5X1 160 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 PARVBQ9HBI1 364 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 PYCARDQ9ULZ3 195 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 TIMM22Q9Y584 194 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 TMEM56-RWDD3S4R434 201 aa2.02□□□□□ -2.09
LSM5-209ENST00000468872 PLECQ15149 4684 aaKnown RBP2.02□□□□□ -2.09
LSM5-209ENST00000468872 MYH3P11055 1940 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 PLXND1Q9Y4D7 1925 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 INTS1Q8N201 2190 aaKnown RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 A0A1W2PQD3 144 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 PPP5D1E7EU14 171 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 H3BRN7 92 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 OVOL1O14753 267 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 GABRA2P47869 451 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 GNA12Q03113 381 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 GRK1Q15835 563 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 PCOTHQ58A44 107 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 IBA57Q5T440 356 aaKnown RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 GLT8D1Q68CQ7 371 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 AGTRAPQ6RW13 159 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 PHF13Q86YI8 300 aaPredicted RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 MRPL30Q8TCC3 161 aaKnown RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 SMCR5Q8TEV8 140 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 KLF6Q99612 283 aaPredicted RBP2.01□□□□□ -2.09
LSM5-209ENST00000468872 C20orf27Q9GZN8 174 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 BIN3Q9NQY0 253 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 MED29Q9NX70 200 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 PRNDQ9UKY0 176 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 CYSLTR1Q9Y271 337 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 OBSL1O75147 1896 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 FOCADQ5VW36 1801 aa2.01□□□□□ -2.09
LSM5-209ENST00000468872 ROCK2O75116 1388 aaKnown RBP2□□□□□ -2.09
LSM5-209ENST00000468872 TRBV20OR9-2A0A075B6H5 130 aa2□□□□□ -2.09
LSM5-209ENST00000468872 hCG_1818297A0A087WSY0 165 aa2□□□□□ -2.09
LSM5-209ENST00000468872 TRAV4A0A0B4J268 109 aa2□□□□□ -2.09
LSM5-209ENST00000468872 A8MT66 165 aa2□□□□□ -2.09
LSM5-209ENST00000468872 GPR31O00270 319 aa2□□□□□ -2.09
LSM5-209ENST00000468872 CRYZL1O95825 349 aa2□□□□□ -2.09
LSM5-209ENST00000468872 C8GP07360 202 aa2□□□□□ -2.09
LSM5-209ENST00000468872 CD24P25063 80 aa2□□□□□ -2.09
LSM5-209ENST00000468872 SERPINB1P30740 379 aa2□□□□□ -2.09
LSM5-209ENST00000468872 RPL27AP46776 148 aaKnown RBP2□□□□□ -2.09
LSM5-209ENST00000468872 DEFA3P59666 94 aa2□□□□□ -2.09
LSM5-209ENST00000468872 TPRXLQ17RH7 258 aa2□□□□□ -2.09
LSM5-209ENST00000468872 SSX8Q7RTT4 187 aa2□□□□□ -2.09
LSM5-209ENST00000468872 EXOC3-AS1Q8N2X6 119 aa2□□□□□ -2.09
LSM5-209ENST00000468872 OR10K1Q8NGX5 313 aa2□□□□□ -2.09
LSM5-209ENST00000468872 OR13C6PQ8NH95 151 aa2□□□□□ -2.09
LSM5-209ENST00000468872 GNPDA2Q8TDQ7 276 aa2□□□□□ -2.09
LSM5-209ENST00000468872 TTTY13Q9BZ97 58 aa2□□□□□ -2.09
LSM5-209ENST00000468872 EFCAB1Q9HAE3 211 aa2□□□□□ -2.09
LSM5-209ENST00000468872 C19orf12Q9NSK7 152 aa2□□□□□ -2.09
LSM5-209ENST00000468872 NDUFB11Q9NX14 153 aa2□□□□□ -2.09
LSM5-209ENST00000468872 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
LSM5-209ENST00000468872 MYO7BQ6PIF6 2116 aa2□□□□□ -2.09
LSM5-209ENST00000468872 DNAH11Q96DT5 4516 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 KIAA1549LQ6ZVL6 1849 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 A0A1B0GW54 56 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 I3L521 148 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 PIRO00625 290 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
LSM5-209ENST00000468872 IFNA21P01568 189 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 LGALS1P09382 135 aaKnown RBP1.99□□□□□ -2.09
LSM5-209ENST00000468872 IFI30P13284 250 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 IDO1P14902 403 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 ATP5G3P48201 142 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 RHOBP62745 196 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 RPL30P62888 115 aaKnown RBP1.99□□□□□ -2.09
LSM5-209ENST00000468872 TMEM78Q5T7P6 136 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 GRINAQ7Z429 371 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.99□□□□□ -2.09
LSM5-209ENST00000468872 OR4X2Q8NGF9 303 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms