RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 RNF212Q495C1 297 aa15.37■□□□□ 0.05
TTC28-204ENST00000468807 TMEM252Q8N6L7 170 aa15.37■□□□□ 0.05
TTC28-204ENST00000468807 C15orf53Q8NAA6 179 aa15.37■□□□□ 0.05
TTC28-204ENST00000468807 PFDN5Q99471 154 aa15.37■□□□□ 0.05
TTC28-204ENST00000468807 J3KRW8 73 aa15.36■□□□□ 0.05
TTC28-204ENST00000468807 FGF7P21781 194 aa15.36■□□□□ 0.05
TTC28-204ENST00000468807 KIR3DS1Q14943 382 aa15.36■□□□□ 0.05
TTC28-204ENST00000468807 ATG101Q9BSB4 218 aa15.36■□□□□ 0.05
TTC28-204ENST00000468807 GPN1Q9HCN4 374 aaPredicted RBP15.36■□□□□ 0.05
TTC28-204ENST00000468807 SLC39A9Q9NUM3 307 aa15.36■□□□□ 0.05
TTC28-204ENST00000468807 NACAE9PAV3 2078 aa15.36■□□□□ 0.05
TTC28-204ENST00000468807 PKD1P98161 4303 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 H7BYZ3 331 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 RTL8CO15255 209 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 NUDT3O95989 172 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 ATP5G1P05496 136 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 ATP5G3P48201 142 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 GUK1Q16774 197 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 VWC2Q2TAL6 325 aa15.35■□□□□ 0.05
TTC28-204ENST00000468807 NOP10Q9NPE3 64 aaKnown RBP15.35■□□□□ 0.05
TTC28-204ENST00000468807 TIMM8BQ9Y5J9 83 aaPredicted RBP15.35■□□□□ 0.05
TTC28-204ENST00000468807 RPL29P47914 159 aaKnown RBP15.34■□□□□ 0.05
TTC28-204ENST00000468807 GFI1BQ5VTD9 330 aa15.34■□□□□ 0.05
TTC28-204ENST00000468807 ENKURQ8TC29 256 aa15.34■□□□□ 0.05
TTC28-204ENST00000468807 SAT2Q96F10 170 aaPredicted RBP15.34■□□□□ 0.05
TTC28-204ENST00000468807 ZNF493Q6ZR52 646 aa15.33■□□□□ 0.04
TTC28-204ENST00000468807 TMEM263Q8WUH6 116 aaKnown RBP15.33■□□□□ 0.04
TTC28-204ENST00000468807 S100ZQ8WXG8 99 aa15.33■□□□□ 0.04
TTC28-204ENST00000468807 ZNF586Q9NXT0 402 aa15.33■□□□□ 0.04
TTC28-204ENST00000468807 CBY3A6NI87 242 aa15.32■□□□□ 0.04
TTC28-204ENST00000468807 IL15RAQ13261 267 aa15.32■□□□□ 0.04
TTC28-204ENST00000468807 ASAH1Q13510 395 aa15.32■□□□□ 0.04
TTC28-204ENST00000468807 ATP6V1FQ16864 119 aa15.32■□□□□ 0.04
TTC28-204ENST00000468807 CCDC28AQ8IWP9 274 aa15.32■□□□□ 0.04
TTC28-204ENST00000468807 RNASE8Q8TDE3 154 aaKnown RBP15.32■□□□□ 0.04
TTC28-204ENST00000468807 C20orf144Q9BQM9 153 aa15.32■□□□□ 0.04
TTC28-204ENST00000468807 DYNC1H1Q14204 4646 aaKnown RBP15.31■□□□□ 0.04
TTC28-204ENST00000468807 SIX6O95475 246 aa15.31■□□□□ 0.04
TTC28-204ENST00000468807 LEPP41159 167 aa15.31■□□□□ 0.04
TTC28-204ENST00000468807 SOHLH1Q5JUK2 328 aa15.31■□□□□ 0.04
TTC28-204ENST00000468807 A0A1B0GVY2 172 aa15.3■□□□□ 0.04
TTC28-204ENST00000468807 CT45A10P0DMU9 189 aa15.3■□□□□ 0.04
TTC28-204ENST00000468807 Q6ZR54 194 aa15.3■□□□□ 0.04
TTC28-204ENST00000468807 LINC00299Q6ZSB3 139 aa15.3■□□□□ 0.04
TTC28-204ENST00000468807 TIMM9Q9Y5J7 89 aa15.3■□□□□ 0.04
TTC28-204ENST00000468807 DNAH11Q96DT5 4516 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 TRBV19A0A075B6N1 114 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 TRAV12-3A0A0B4J271 114 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 NPIPB6E9PJ23 425 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 PYYP10082 97 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 LRRC37A5PQ49AS3 106 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 THAP6Q8TBB0 222 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 BLNKQ8WV28 456 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 NPCDR1Q9BY65 106 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 PCLOQ9Y6V0 5065 aa15.29■□□□□ 0.04
TTC28-204ENST00000468807 M0R3E3 92 aa15.28■□□□□ 0.04
TTC28-204ENST00000468807 MPDU1O75352 247 aa15.28■□□□□ 0.04
TTC28-204ENST00000468807 RLN2P04090 185 aa15.28■□□□□ 0.04
TTC28-204ENST00000468807 NHLH2Q02577 135 aa15.28■□□□□ 0.04
TTC28-204ENST00000468807 GCSAMLQ5JQS6 135 aa15.28■□□□□ 0.04
TTC28-204ENST00000468807 OR5C1Q8NGR4 320 aa15.28■□□□□ 0.04
TTC28-204ENST00000468807 GAGE12BA1L429 117 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 SNURFLB1AK76 121 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 ZNF253O75346 499 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 GAGE7O76087 117 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 GAGE12FP0CL80 117 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 GAGE12GP0CL81 117 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 GAGE12IP0CL82 117 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 FAM3BP58499 235 aaPredicted RBP15.27■□□□□ 0.04
TTC28-204ENST00000468807 ERCC8Q13216 396 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 OR5I1Q13606 314 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 CLINT1Q14677 625 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 C1orf134Q5TEV5 83 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 CHAC2Q8WUX2 184 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 RNF141Q8WVD5 230 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 ODF3Q96PU9 254 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 SLC25A31Q9H0C2 315 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 TMEM14CQ9P0S9 112 aa15.27■□□□□ 0.04
TTC28-204ENST00000468807 UPK1BO75841 260 aa15.26■□□□□ 0.03
TTC28-204ENST00000468807 HIST1H1EP10412 219 aaKnown RBP15.26■□□□□ 0.03
TTC28-204ENST00000468807 MRPL53Q96EL3 112 aaKnown RBP15.26■□□□□ 0.03
TTC28-204ENST00000468807 OR5AC2Q9NZP5 309 aa15.26■□□□□ 0.03
TTC28-204ENST00000468807 E5RGE8 158 aa15.25■□□□□ 0.03
TTC28-204ENST00000468807 NDUFB4O95168 129 aa15.25■□□□□ 0.03
TTC28-204ENST00000468807 CCL18P55774 89 aa15.25■□□□□ 0.03
TTC28-204ENST00000468807 EXOC3-AS1Q8N2X6 119 aa15.25■□□□□ 0.03
TTC28-204ENST00000468807 AAMDCQ9H7C9 122 aa15.25■□□□□ 0.03
TTC28-204ENST00000468807 PYGO2Q9BRQ0 406 aa15.24■□□□□ 0.03
TTC28-204ENST00000468807 SLC25A2Q9BXI2 301 aa15.24■□□□□ 0.03
TTC28-204ENST00000468807 NMES1Q9C002 83 aa15.24■□□□□ 0.03
TTC28-204ENST00000468807 PRELID1Q9Y255 219 aa15.24■□□□□ 0.03
TTC28-204ENST00000468807 TRAV26-1A0A087WT03 109 aa15.23■□□□□ 0.03
TTC28-204ENST00000468807 A0A0J9YY99 117 aa15.23■□□□□ 0.03
TTC28-204ENST00000468807 PDE6HQ13956 83 aa15.23■□□□□ 0.03
TTC28-204ENST00000468807 FAM122CQ6P4D5 195 aa15.23■□□□□ 0.03
TTC28-204ENST00000468807 MIR17HGQ75NE6 70 aa15.23■□□□□ 0.03
TTC28-204ENST00000468807 GNPNAT1Q96EK6 184 aaPredicted RBP15.23■□□□□ 0.03
TTC28-204ENST00000468807 C7orf71A4D174 169 aa15.22■□□□□ 0.03
TTC28-204ENST00000468807 INMT-MINDY4F8WBC2 141 aa15.22■□□□□ 0.03
TTC28-204ENST00000468807 PRAF2O60831 178 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms