RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 HLA-DRB4P13762 266 aa8.34□□□□□ -1.07
MSH5-214ENST00000468602 FGF8P55075 233 aaPredicted RBP8.34□□□□□ -1.07
MSH5-214ENST00000468602 CD81P60033 236 aa8.34□□□□□ -1.07
MSH5-214ENST00000468602 CLLU1Q5K131 121 aa8.34□□□□□ -1.07
MSH5-214ENST00000468602 ODF3Q96PU9 254 aa8.34□□□□□ -1.07
MSH5-214ENST00000468602 TMPRSS5Q9H3S3 457 aa8.34□□□□□ -1.07
MSH5-214ENST00000468602 HLA-DRB4X5D2U9 266 aa8.34□□□□□ -1.07
MSH5-214ENST00000468602 IGKV3-7A0A075B6H7 116 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 H3BMM0 161 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 DEFB131AP59861 70 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 RANP62826 216 aaKnown RBP8.33□□□□□ -1.08
MSH5-214ENST00000468602 CCL20P78556 96 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 KIR2DL5BQ8NHK3 375 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 BLNKQ8WV28 456 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 HIST1H2BAQ96A08 127 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 RPUSD4Q96CM3 377 aaKnown RBP8.33□□□□□ -1.08
MSH5-214ENST00000468602 CITED4Q96RK1 184 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 SMDT1Q9H4I9 107 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 MED9Q9NWA0 146 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 AURKAIP1Q9NWT8 199 aaPredicted RBP8.33□□□□□ -1.08
MSH5-214ENST00000468602 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 YTHDF2Q9Y5A9 579 aaKnown RBP8.33□□□□□ -1.08
MSH5-214ENST00000468602 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
MSH5-214ENST00000468602 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 PGPA6NDG6 321 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 DIRC3C9JPN6 131 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 NPIPB6E9PJ23 425 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 EIF3GO75821 320 aaKnown RBP eCLIP8.32□□□□□ -1.08
MSH5-214ENST00000468602 DUSP14O95147 198 aaKnown RBP8.32□□□□□ -1.08
MSH5-214ENST00000468602 IFNA1P01562 189 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 TFPI2P48307 235 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 ICAM4Q14773 271 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 TRPT1Q86TN4 253 aaKnown RBP8.32□□□□□ -1.08
MSH5-214ENST00000468602 WFDC3Q8IUB2 231 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 OR8A1Q8NGG7 326 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 LINC00477Q96M19 166 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 EPDR1Q9UM22 224 aa8.32□□□□□ -1.08
MSH5-214ENST00000468602 K7EIL1 84 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 M0R3E3 92 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 TCRAP04437 139 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 BCL2P10415 239 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 CSN1S1P47710 185 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 SUMO1P63165 101 aaKnown RBP8.31□□□□□ -1.08
MSH5-214ENST00000468602 EBLN2Q6P2I7 272 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 COX8CQ7Z4L0 72 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 APRG1Q8IVJ8 170 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 RNF182Q8N6D2 247 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 PRR25Q96S07 402 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 ATG101Q9BSB4 218 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 SELENOKQ9Y6D0 94 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 AGRNO00468 2067 aa8.31□□□□□ -1.08
MSH5-214ENST00000468602 LOC102723971A0A1B0GUV8 181 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 F6UZH7 168 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 H3BTX0 84 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 PDE6DO43924 150 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 PAGE4O60829 102 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 IGHV4-30-4P0DP06 118 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
MSH5-214ENST00000468602 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
MSH5-214ENST00000468602 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 ZNF738Q8NE65 137 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 LINC00052Q96N35 136 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 VAX2Q9UIW0 290 aa8.3□□□□□ -1.08
MSH5-214ENST00000468602 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
MSH5-214ENST00000468602 C11orf94C9JXX5 98 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 PRAC2D3DTV9 90 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 TMEM250H0YL14 139 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 UBE2CO00762 179 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 IGLV2-11P01706 119 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 AMBPP02760 352 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 S100A9P06702 114 aaKnown RBP8.29□□□□□ -1.08
MSH5-214ENST00000468602 SNRPCP09234 159 aaKnown RBP8.29□□□□□ -1.08
MSH5-214ENST00000468602 CRISP2P16562 243 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 RAB14P61106 215 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 GDF5OSQ5U4N7 250 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 IGFL4Q6B9Z1 124 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 DEFB125Q8N687 156 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 C2CD4CQ8TF44 421 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
MSH5-214ENST00000468602 RAB19A4D1S5 217 aa8.28□□□□□ -1.08
MSH5-214ENST00000468602 RBFOX3A6NFN3 312 aa8.28□□□□□ -1.08
MSH5-214ENST00000468602 K7EQM0 130 aa8.28□□□□□ -1.08
MSH5-214ENST00000468602 CNN1P51911 297 aaKnown RBP8.28□□□□□ -1.08
MSH5-214ENST00000468602 NUTF2P61970 127 aaKnown RBP8.28□□□□□ -1.08
MSH5-214ENST00000468602 OR10J6PQ8NGY7 276 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms