RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 WI2-2373I1.2A0A1W2PRP0 233 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 GNG7O60262 68 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 PSG9Q00887 426 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 BCL6BQ8N143 479 aaPredicted RBP12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 NEU4Q8WWR8 484 aaPredicted RBP12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 WFDC12Q8WWY7 111 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 LY6G5BQ8NDX9 201 aa12.4□□□□□ -0.42
TSPAN4-211ENST00000468468 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
TSPAN4-211ENST00000468468 ITPR1Q14643 2758 aa12.4□□□□□ -0.42
TSPAN4-211ENST00000468468 HRNRQ86YZ3 2850 aaPredicted RBP12.4□□□□□ -0.42
TSPAN4-211ENST00000468468 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.43
TSPAN4-211ENST00000468468 NUDT3O95989 172 aa12.4□□□□□ -0.43
TSPAN4-211ENST00000468468 HES1Q14469 280 aa12.4□□□□□ -0.43
TSPAN4-211ENST00000468468 CFHR4Q92496 578 aa12.4□□□□□ -0.43
TSPAN4-211ENST00000468468 KLRD1Q13241 179 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 AP5S1Q9NUS5 200 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 A0A1B0GW15 77 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 A0A1W2PRD5 423 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 A0A1W2PRF3 423 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 A0A1W2PRM7 423 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 CT45A10P0DMU9 189 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 SLC25A34Q6PIV7 304 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
TSPAN4-211ENST00000468468 NDUFA3O95167 84 aa12.38□□□□□ -0.43
TSPAN4-211ENST00000468468 NPBQ8NG41 125 aa12.38□□□□□ -0.43
TSPAN4-211ENST00000468468 OR11H6Q8NGC7 330 aa12.38□□□□□ -0.43
TSPAN4-211ENST00000468468 PRSS3P2Q8NHM4 247 aa12.38□□□□□ -0.43
TSPAN4-211ENST00000468468 PMCHL2Q9BQD1 86 aa12.38□□□□□ -0.43
TSPAN4-211ENST00000468468 CEACAM3P40198 252 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 MFAP4P55083 255 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 Q6AWC8 147 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 FA2HQ7L5A8 372 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 FANCD2OSQ96PS1 177 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 TMSB15BA0A087X1C1 80 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 BVES-AS1Q5T3Y7 98 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
TSPAN4-211ENST00000468468 SERTM2A0A1B0GWG4 89 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 RPS20P60866 119 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 IGLV11-55A0A075B6I3 123 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 BMI1P35226 326 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 CSN1S1P47710 185 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 PDE6HQ13956 83 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 LINC01545Q5VT33 79 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 LYZL1Q6UWQ5 148 aa12.36□□□□□ -0.43
TSPAN4-211ENST00000468468 TMEM189A5PLL7 270 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 ZNF747Q9BV97 191 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 PRORYQ9H606 182 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 DEFB125Q8N687 156 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 OR1N2Q8NGR9 330 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 OR10AG1Q8NH19 301 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 TMEM213A2RRL7 107 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 IGHV3-23P01764 117 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 IFI27P40305 119 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
TSPAN4-211ENST00000468468 ARHGAP32A7KAX9 2087 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 LOC389332A0A1B0GUA5 103 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 NPIPB5A8MRT5 1133 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 F8W735 103 aaPredicted RBP12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 SH2D1AO60880 128 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 ARPC1AQ92747 370 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 IGKV2-40A0A087WW87 121 aaPredicted RBP12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 D6R8Y8 96 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 IGKV2D-40P01614 121 aaPredicted RBP12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 FAM106CPP0CH98 169 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 FAM106AQ4KMX7 169 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
TSPAN4-211ENST00000468468 A0A1W2PPR1 153 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 ODF3BA8MYP8 253 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 NCR2O95944 276 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 UQCRFS1P47985 274 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 NDPQ00604 133 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 FOXE3Q13461 319 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 ZNF48Q96MX3 618 aaPredicted RBP12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 PRTN3P24158 256 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 C11orf71Q6IPW1 123 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 AMN1Q8IY45 258 aa12.33□□□□□ -0.44
TSPAN4-211ENST00000468468 M0R1W7 72 aa12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 TTC9CQ8N5M4 171 aa12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 NAA38Q9BRA0 125 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 LOXL1Q08397 574 aaPredicted RBP12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 C12orf54Q6X4T0 127 aa12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 PRELID3AQ96N28 172 aa12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 SIGLEC8Q9NYZ4 499 aa12.32□□□□□ -0.44
TSPAN4-211ENST00000468468 A0A087X0K7 114 aa12.31□□□□□ -0.44
TSPAN4-211ENST00000468468 DYNAPQ8N1N2 210 aa12.31□□□□□ -0.44
TSPAN4-211ENST00000468468 G3V4G9 280 aa12.31□□□□□ -0.44
TSPAN4-211ENST00000468468 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-211ENST00000468468 OR8A1Q8NGG7 326 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms