RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 H7BYZ3 331 aa17.1■□□□□ 0.33
PTCH1-210ENST00000468211 CAV2P51636 162 aa17.1■□□□□ 0.33
PTCH1-210ENST00000468211 ZNF493Q6ZR52 646 aa17.1■□□□□ 0.33
PTCH1-210ENST00000468211 ZNF431Q8TF32 576 aaPredicted RBP17.1■□□□□ 0.33
PTCH1-210ENST00000468211 DNAJC4Q9NNZ3 241 aa17.1■□□□□ 0.33
PTCH1-210ENST00000468211 LINC00588Q9Y4M8 146 aa17.1■□□□□ 0.33
PTCH1-210ENST00000468211 C5orf51A6NDU8 294 aa17.09■□□□□ 0.33
PTCH1-210ENST00000468211 OR10J6PQ8NGY7 276 aa17.09■□□□□ 0.33
PTCH1-210ENST00000468211 NUDT15Q9NV35 164 aa17.09■□□□□ 0.33
PTCH1-210ENST00000468211 WDR83OSQ9Y284 106 aa17.09■□□□□ 0.33
PTCH1-210ENST00000468211 NBDYA0A0U1RRE5 68 aa17.08■□□□□ 0.32
PTCH1-210ENST00000468211 CT45A10P0DMU9 189 aa17.08■□□□□ 0.32
PTCH1-210ENST00000468211 TNP2Q05952 138 aa17.08■□□□□ 0.32
PTCH1-210ENST00000468211 C20orf144Q9BQM9 153 aa17.08■□□□□ 0.32
PTCH1-210ENST00000468211 PXMP4Q9Y6I8 212 aa17.08■□□□□ 0.32
PTCH1-210ENST00000468211 J3KRW8 73 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 VWC2Q2TAL6 325 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 C12orf45Q8N5I9 185 aaPredicted RBP17.07■□□□□ 0.32
PTCH1-210ENST00000468211 LINC00612Q8N6U2 182 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 C2orf50Q96LR7 162 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 UQCC1Q9NVA1 299 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 ZNF586Q9NXT0 402 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 ABCA13Q86UQ4 5058 aa17.07■□□□□ 0.32
PTCH1-210ENST00000468211 IGSF23A1L1A6 192 aa17.06■□□□□ 0.32
PTCH1-210ENST00000468211 IL15RAQ13261 267 aa17.06■□□□□ 0.32
PTCH1-210ENST00000468211 RAB31Q13636 194 aa17.06■□□□□ 0.32
PTCH1-210ENST00000468211 Q6ZRG5 221 aa17.06■□□□□ 0.32
PTCH1-210ENST00000468211 NPIPB6E9PJ23 425 aa17.05■□□□□ 0.32
PTCH1-210ENST00000468211 TRAV12-3A0A0B4J271 114 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 UBE2L5PA0A1B0GUS4 154 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 HOXA5P20719 270 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 CCL18P55774 89 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 S100A10P60903 97 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 OR5I1Q13606 314 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 LYRM2Q9NU23 88 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-210ENST00000468211 SLC39A9Q9NUM3 307 aa17.04■□□□□ 0.32
PTCH1-210ENST00000468211 GAGE12BA1L429 117 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 GAGE7O76087 117 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 H2AFB2P0C5Z0 115 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 GAGE12FP0CL80 117 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 GAGE12GP0CL81 117 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 GAGE12IP0CL82 117 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 RPL29P47914 159 aaKnown RBP17.03■□□□□ 0.32
PTCH1-210ENST00000468211 SULT1A1P50225 295 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 RAB32Q13637 225 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 SSX7Q7RTT5 188 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 CCDC28AQ8IWP9 274 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 C6orf223Q8N319 242 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 TMEM252Q8N6L7 170 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 OR1L4Q8NGR5 311 aa17.03■□□□□ 0.32
PTCH1-210ENST00000468211 TRAV26-1A0A087WT03 109 aa17.02■□□□□ 0.32
PTCH1-210ENST00000468211 M0R3E3 92 aa17.02■□□□□ 0.32
PTCH1-210ENST00000468211 BAXQ07812 192 aa17.02■□□□□ 0.32
PTCH1-210ENST00000468211 GUK1Q16774 197 aa17.02■□□□□ 0.32
PTCH1-210ENST00000468211 ODF3Q96PU9 254 aa17.02■□□□□ 0.32
PTCH1-210ENST00000468211 A0A0J9YY99 117 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 NDUFB4O95168 129 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 PVALBP20472 110 aaPredicted RBP17.01■□□□□ 0.31
PTCH1-210ENST00000468211 LEPP41159 167 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 ERCC8Q13216 396 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 CLINT1Q14677 625 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 PFDN5Q99471 154 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 KRTAP4-5Q9BYR2 181 aa17.01■□□□□ 0.31
PTCH1-210ENST00000468211 TRBV19A0A075B6N1 114 aa17■□□□□ 0.31
PTCH1-210ENST00000468211 S100A11P31949 105 aa17■□□□□ 0.31
PTCH1-210ENST00000468211 GNPNAT1Q96EK6 184 aaPredicted RBP17■□□□□ 0.31
PTCH1-210ENST00000468211 HSPG2P98160 4391 aa17■□□□□ 0.31
PTCH1-210ENST00000468211 SNURFLB1AK76 121 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 ZNF253O75346 499 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 RLN2P04090 185 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 PYYP10082 97 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 M6PRP20645 277 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 FGF7P21781 194 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 GCSAMLQ5JQS6 135 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 RXFP4Q8TDU9 374 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 CHAC2Q8WUX2 184 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 KRTAP1-5Q9BYS1 174 aa16.99■□□□□ 0.31
PTCH1-210ENST00000468211 Q6ZTI0 123 aa16.98■□□□□ 0.31
PTCH1-210ENST00000468211 TMPRSS5Q9H3S3 457 aa16.98■□□□□ 0.31
PTCH1-210ENST00000468211 TMEM14CQ9P0S9 112 aa16.98■□□□□ 0.31
PTCH1-210ENST00000468211 LRP1BQ9NZR2 4599 aa16.97■□□□□ 0.31
PTCH1-210ENST00000468211 STX12Q86Y82 276 aa16.97■□□□□ 0.31
PTCH1-210ENST00000468211 MRPL53Q96EL3 112 aaKnown RBP16.97■□□□□ 0.31
PTCH1-210ENST00000468211 PYGO2Q9BRQ0 406 aa16.97■□□□□ 0.31
PTCH1-210ENST00000468211 CCDC32Q9BV29 185 aa16.97■□□□□ 0.31
PTCH1-210ENST00000468211 Q9H8V8 135 aa16.97■□□□□ 0.31
PTCH1-210ENST00000468211 GPN1Q9HCN4 374 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-210ENST00000468211 HBG1P69891 147 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 HBG2P69892 147 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 CD300CQ08708 224 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 DAZ2Q13117 558 aaKnown RBP16.96■□□□□ 0.31
PTCH1-210ENST00000468211 ESRGQ1W209 222 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 EXOC3-AS1Q8N2X6 119 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 ZNF503Q96F45 646 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 FAM19A4Q96LR4 140 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 AGPAT4-IT1Q9H0P7 198 aa16.96■□□□□ 0.31
PTCH1-210ENST00000468211 FAM240BA0A1B0GVZ2 78 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 C7orf71A4D174 169 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 SLC25A5P05141 298 aaKnown RBP16.95■□□□□ 0.3
PTCH1-210ENST00000468211 HIST1H1EP10412 219 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms